Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0775 ATGTCGAAGAGAGGTCGCGGTGGTTCGGCCGGTAACAAGTTCCGGATGTCATTGGGTCTACCGGTGGCGGCAACGGTGAACTGTGCCGATAACACTGGAGCTAAGAATCTGTACATCATTTCAGTGAAGGGGATCAAGGGTCGCCTCAACCGTTTGCCGTCGGCTTGCGTTGGGGACATGGTCATGGCCACCGTGAAGAAAGGGAAGCCTGATCTCAGGAAGAAGGTCTTACCGGCAGTGATCGTCCGCCAGCGCAAGCCATGGCGCAGAAAGGACGGTGTTTACATGTACTTCGAAGATAACGCTGGTGTCATTGTGAATCCCAAGGGTGAAATGAAAGGTTCTGCTATCACCGGTCCAATTGGCAAGGAGTGTGCAGATTTGTGGCCAAGGATTGCAAGTGCAGCCAATGCTATTGTTTGA 423 0.5272 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0775 140 Gene3D Ribosomal protein L14 1 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Glsi11g0775 140 SUPERFAMILY Ribosomal protein L14 11 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Glsi11g0775 140 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 20 139 IPR000218 GO:0003735|GO:0005840|GO:0006412
Glsi11g0775 140 SMART Ribosomal_L14_2 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Glsi11g0775 140 Hamap 50S ribosomal protein L14 [rplN]. 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Glsi11g0775 140 ProSitePatterns Ribosomal protein L14 signature. 79 105 IPR019972 -
Glsi11g0775 140 FunFam 60S ribosomal protein L23 1 140 - -
Glsi11g0775 140 Pfam Ribosomal protein L14p/L23e 22 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0775 Glsi-ChrGlsi11 4868908 4870911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0775 1 140 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 97.857 7.48e-99 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2989 02 78627397 78631881 Glsi11g0775 11 4868908 4870911 CCT
Glsi11g0775 11 4868908 4870911 Glsi11g0775 11 4868908 4870911 ECH