Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0755 ATGGATCATGTGATTGCTGGGAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGATCTTTTGGGGAGCTTTATTTAGGTGTTAATGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACCAAGCATCCACAGCTTCACTATGAATCGAAGTTGTACATGCTTCTTCAAGGAGGAACGGGGATTCCGCACCTCAAGTGGTTTGGTGTTGAGGGAGACTACAATGTTATGGTTATTGACCTTCTTGGACCAAGCTTGGAAGATCTATTCAACTATTGCAACAGGAAGTTCACATTGAAGACCGTGTTGATGCTTGCTGATCAATTGATTAACAGAGTTGAATATATGCATTCGAGAGGTTTTCTTCACCGTGACATAAAGCCTGACAATTTTTTAATGGGCCTAGGGCGCAAAGCAAACCAGGTTTACGTCATTGACTATGGCCTTGCAAAAAAGTATAGGGATCTCCAGACTCATAAGCATATACCATACAGGGAAAACAAGAACCTCACTGGTACAGCTCGCTATGCTAGTGTCAACACTCATCTTGGAATTGAACAAAGTAGAAGAGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCCTGGCAGGGTCTGAAGGCTGGCACCAAAAAACAAAAGTATGATAAGATCAGTGAGAAGAAGTCATCAACTCCCATAGAGGTGCTCTGCAAATCATATCCATCTGAATTTGTATCATACTTCCACTATTGCCGATCATTGCGGTTTGAGGACAAGCCAGATTATTCATACCTGAAGAGGCTTTTTCGAGACTTATTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCACAGATTGGTGGCAGTTCTAGAGGGCGGCATGGCAGTGGCAAGGCACTTATGAATGCAGGACCATCTGTACAAAAGCCAGAAAAGAGCCCAGCTGGAAAAGAGATTCGCGAGAAATATTCTGGTGCTGTTGAAGCATTCTCACGGAGGAACCTTACAAGTTCTAGTCCTAGTCCTCGTGATCACACCAAGCATAGGACTTTTGAGGATGTACCGGCACACAGGGATGTGCAATATGATCAAGAGAAGGGCCGCAGTTCCTCTCGATATGGCAGCACTTCAAGAAAAGCCATAATCTCATCAAACAAGCCAAGTTCTTCAGGTGACCATAGTGATAGTCGTACTGGTAGGCTGACTTCAACTGGTAGCCGCCCATCTACTGCATATAGAACCCAAACACTGTATGAGACCAAACAACCAACTTTTACACGCAATGCATCTACGAGAGGCAATCGTGATGATCCTCTTCGGAGCTTTGAGCTCCTCTCTATTAGGAAGTAA 1386 0.4365 MDHVIAGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKSSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGGSSRGRHGSGKALMNAGPSVQKPEKSPAGKEIREKYSGAVEAFSRRNLTSSSPSPRDHTKHRTFEDVPAHRDVQYDQEKGRSSSRYGSTSRKAIISSNKPSSSGDHSDSRTGRLTSTGSRPSTAYRTQTLYETKQPTFTRNASTRGNRDDPLRSFELLSIRK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0755 461 FunFam Putative Casein kinase I 1 85 - -
Glsi11g0755 461 CDD STKc_CK1_delta_epsilon 8 282 - -
Glsi11g0755 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Glsi11g0755 461 MobiDBLite consensus disorder prediction 379 444 - -
Glsi11g0755 461 MobiDBLite consensus disorder prediction 325 339 - -
Glsi11g0755 461 MobiDBLite consensus disorder prediction 354 378 - -
Glsi11g0755 461 MobiDBLite consensus disorder prediction 445 461 - -
Glsi11g0755 461 SMART serkin_6 9 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0755 461 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
Glsi11g0755 461 PANTHER CASEIN KINASE-RELATED 9 373 - -
Glsi11g0755 461 FunFam Casein kinase 1-like protein 1 330 - -
Glsi11g0755 461 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0755 461 MobiDBLite consensus disorder prediction 301 461 - -
Glsi11g0755 461 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Glsi11g0755 461 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Glsi11g0755 461 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0755 Glsi-ChrGlsi11 4785440 4791143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0755 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 5.26e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Glsi11g0755 Pkinase 8.3e-26 CL0016