Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0754 ATGGATTCCGCGAGGAGCTGGTTTCATAAGTTTCAGCCACGGGATAAAATGAGGGCATCTACCAAGAAAAAAGAGCACAGCGCTGGAGGAAAACAAGATTCGAATGAACCGGTAGATGAAGAAGCTCTTTCCAGTGTCACAAAGCAGAAGGTTGCTGCAGCAAAGCAGTATATTGAGAACCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGAAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCAGAGGAAGATCAAAACAACCTGCTTAAGTTTTTAGAGAAAAAGGAAACGGAATATATGCGCCTTCAGAGGCACAAGATGGGTGTTGATGATTTTGAGTTATTAACTATGATTGGAAAAGGCGCATTTGGGGAGGTCAGAGTCTGCAGGGAAAAGACAACAGGTCATGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTGAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGACAGCAATTGCATTGTCAAACTTTATTGTTCTTTTCAGGATGATGACTATCTGTATCTTATAATGGAGTATCTACCGGGTGGGGACATGATGACTCTTCTTATGAGAAAGGATACCTTGACTGAAGATGAAGCCAGATTCTATGTAGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATCCATAGGGATATCAAGCCTGATAACTTGTTACTTGATAGATATGGACACTTGAGGCTGTCCGATTTTGGACTATGTAAACCATTAGATTGCAGTACACTTCAAGAACAGGACTTTTCAATAGGTCAGAATCCAAATGGATCTACACAGACTGATGAACGTTCAGCTCCAAAACGCACACAACAAGAACAATTACAACACTGGCAAAAGAACAGAAGGACACTTGCTTATTCTACTGTTGGTACACCTGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGACTGGTGGTCTCTTGGAGCTATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCCGATGATCCAATGTCAACATGTAGGAAGATAGTAAATTGGAAATCTCACTTGAAATTTCCTGAAGAGGCAAGGCTATCTCCAGAGGCTATAGATGTTATTAGTAAACTTTTGTGTAATGTCAACCACAGGCTGGGGTCAAATGGTGCTGATGAAATAAAGGTTCATCCATTCTTCAAAGGTGTTGAATGGAATAAGCTATATCAAATGGAAGCTGCATTTATTCCGCAGGTCAATGATGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGTCAGACATCCATAATCACCAATCATCAAGAGCCAGTCCATGGAGGAAGATGCTTTCATCGAAGGACATAAATTTTGTTGGATATACATATAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAAAACCTCCAAATCAAAGAGGCCATCTATCAAGTCACTTTTTGATGGTGAGTCAGAGACATCAGAGACGTCTGTGTCTTCAGAGGCGTCTGGAAGCAATCGGTCTACTCAAGGAAGCTTTTTAAAGCTCTTGCCACCCCAATTAGAAGTAACTCATGAAGAATCCTCCTCCTAA 1671 0.4016 MDSARSWFHKFQPRDKMRASTKKKEHSAGGKQDSNEPVDEEALSSVTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTLQEQDFSIGQNPNGSTQTDERSAPKRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAIDVISKLLCNVNHRLGSNGADEIKVHPFFKGVEWNKLYQMEAAFIPQVNDELDTQNFEKFEESDIHNHQSSRASPWRKMLSSKDINFVGYTYKNFEIVNDYQVPGMAELKKTSKSKRPSIKSLFDGESETSETSVSSEASGSNRSTQGSFLKLLPPQLEVTHEESSS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0754 556 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Glsi11g0754 556 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Glsi11g0754 556 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Glsi11g0754 556 Gene3D Phosphorylase Kinase; domain 1 118 447 - -
Glsi11g0754 556 CDD STKc_NDR_like 118 482 - -
Glsi11g0754 556 MobiDBLite consensus disorder prediction 1 38 - -
Glsi11g0754 556 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0754 556 MobiDBLite consensus disorder prediction 1 46 - -
Glsi11g0754 556 CDD MobB_NDR_LATS-like 54 115 - -
Glsi11g0754 556 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Glsi11g0754 556 SUPERFAMILY Protein kinase-like (PK-like) 93 472 IPR011009 -
Glsi11g0754 556 MobiDBLite consensus disorder prediction 278 302 - -
Glsi11g0754 556 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0754 556 MobiDBLite consensus disorder prediction 513 541 - -
Glsi11g0754 556 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Glsi11g0754 556 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 478 - -
Glsi11g0754 556 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Glsi11g0754 556 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0754 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Glsi11g0754 556 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Glsi11g0754 556 Gene3D Transferase(Phosphotransferase) domain 1 204 436 - -
Glsi11g0754 556 MobiDBLite consensus disorder prediction 499 556 - -
Glsi11g0754 556 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0754 Glsi-ChrGlsi11 4772505 4779911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0754 1 513 AGC Kinase Gene Family AT2G20470 79.730 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Glsi11g0754 Pkinase 1.8e-63 CL0016