Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0748 ATGGGTCTTAGAGATATTGGCGCCTCACTTCCTCCTGGGTTTCGGTTTTATCCGAGTGATGAGGAGCTGGTCTGTCACTATCTCTACAAAAAGATCACAAATGAGGAGGTTCTGAAGGGCACTTTGGTCGATATAGACTTGCATACATGCGAGCCATGGCAGCTTCCGGAGGTGGCCAAGCTCAACGCGAACGAATGGTACTTCTTCAGCTTCCGTGACCGTAAATACGCCACAGGGTTTCGGACCAATCGGGCAACGACATCTGGGTATTGGAAAGCAACTGGGAAGGATCGGACAGTGTTGGACCCAATCGCACGTGAGGTTGTTGGGATGAGGAAGACGTTGGTGTTCTACAGGAACAGAGCCCCCAATGGTATGAAAACTGGTTGGATCATGCATGAGTTCCGCTTGGAGACCCCACACATGCCCCCTAAGGAAGACTGGGTTTTGTGCAGAGTTTTTCACAAAAGCAAAGCAGAAAACAGTGACAAACTCAATATGTTTGAGACCACACCGTCCCTAACTTTGGCTTCATCATCTCCAACCAACCAAAGTGTGCCTGCTGGGTTTACCTCTTTCTCCTCCATGGCAACCCAGAACCATAACAGTTCTCTAATGAATCTCCTTCAGTTTTCTCGGGAAACAAACACCAGCAGCAGTGCTGTCACTCAAATTATTCCAAAAGCTGATTATGATGGATGTGATGGGTTCTTATGGGACATGGATCTGGAAGAAAATAGCTTCCAACACGGCGTGGCCTCAAACTTGGACGGAATGAGATTCGAGGTTGATAATGATAGTATTGTTTTGTTATAA 816 0.4718 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEVLKGTLVDIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPIAREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKAENSDKLNMFETTPSLTLASSSPTNQSVPAGFTSFSSMATQNHNSSLMNLLQFSRETNTSSSAVTQIIPKADYDGCDGFLWDMDLEENSFQHGVASNLDGMRFEVDNDSIVLL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0748 271 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Glsi11g0748 271 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Glsi11g0748 271 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Glsi11g0748 271 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 204 - -
Glsi11g0748 271 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0748 Glsi-ChrGlsi11 4726393 4729871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0748 6 176 NAC Transcription Factor Family AT1G56010 54.945 2.38e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi11g0748 NAM 2.4e-37 No_clan