Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0733 ATGGAGAGGGGGAACGCAGAGGTTCGATACAGAGGGATTCGTAGGAGGCCATGGGGTAAGTTTGCTGCAGAGATTCGTGACCCCACCAGAAAAGGGACTCGCATATGGCTGGGAACCTTTGAGACCGCAGAGGACGCTGCGAGGGCTTACGATGCTGCTGCATTTCATTTCAGGGGTCACAGAGCCATTCTCAACTTCCCCAATGAGTACCAATCTCATCGTCCTATTTCATTGCCTCTTCCCTCTTCTTGTTCTTATTCCACCAGACCACCACAACCTCATGATACTTTGGAGTTCGAGTACCTGGATAATAACTTGTTGGACGAACTCCTTCAACCACAAGATCATCACAGCCACGCCAACCTTCCCAATTCTTAA 378 0.4974 MERGNAEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFETAEDAARAYDAAAFHFRGHRAILNFPNEYQSHRPISLPLPSSCSYSTRPPQPHDTLEFEYLDNNLLDELLQPQDHHSHANLPNS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0733 125 PRINTS Ethylene responsive element binding protein signature 33 49 IPR001471 GO:0003700|GO:0006355
Glsi11g0733 125 PRINTS Ethylene responsive element binding protein signature 10 21 IPR001471 GO:0003700|GO:0006355
Glsi11g0733 125 SUPERFAMILY DNA-binding domain 9 68 IPR016177 GO:0003677
Glsi11g0733 125 Pfam AP2 domain 9 60 IPR001471 GO:0003700|GO:0006355
Glsi11g0733 125 PANTHER DNA-BINDING DOMAIN 8 109 IPR044808 GO:0003700|GO:0009873
Glsi11g0733 125 Gene3D AP2/ERF domain 8 68 IPR036955 GO:0003700|GO:0006355
Glsi11g0733 125 ProSiteProfiles AP2/ERF domain profile. 9 67 IPR001471 GO:0003700|GO:0006355
Glsi11g0733 125 CDD AP2 9 68 IPR001471 GO:0003700|GO:0006355
Glsi11g0733 125 SMART rav1_2 9 73 IPR001471 GO:0003700|GO:0006355
Glsi11g0733 125 FunFam Ethylene-responsive transcription factor 2 8 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0733 Glsi-ChrGlsi11 4625463 4625840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0733 5 117 AP2-EREBP Transcription Factor Family AT3G23230 50.376 3.78e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi11g0733 AP2 5.8e-14 CL0081