Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0723 ATGACTGGTGCTAGTTCTCCTTGCGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGCTGTGTTTTTGCACCTTACTTTTGCCACGAACAGGGTGCTACCCATTTTGCAGCTATTCATAAGGTTTTTGGTGCAAGCAATGTTTCAAAACTCCTTGCCCACCTCCCTGTAAGTGACCGTTGTGAAGCTGCCCTCACAATCTCATACGAAGCTCAAGCAAGACTTCAGGATCCAATTTATGGCTGTGTTTCCCATATCTTCGCGCTTCAACAGCAGGTGGTCAGTTTACAAGCACAGCTAGCTTATCTCAAGGAACAAGCAGCTCAGAGCTATCTCAATGCCTCTGCCACTGAAAACCCTAATGAAAAATACTTGGGAAAACCTACGGCTTTCCCTCTTGATCTTCAAAGTTGTTTCCAGCCTGAAAATTCCAGCATGGGCCCACAATTTCTTCCTAATTTATCTAATAATTCCTCAACAACACAACACTACGGTAATACTACTTTCATGGATCCCAACCCTGTCGGGAATTATGAAAATTCAGGAACCTTGGATGAAAGGATCTCATTTTCTAGCTTTGATGAGACTTCTAACTCCATGTCCTATGACATGCAAACACCCTCCAAGCAGTGGGCCTTCCAGGAAGTGGATGATCTACAGTCAGTGGCTTTTGGTTTCAGTCGATCAGCTTCGTGA 699 0.4449 MTGASSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAALTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLAYLKEQAAQSYLNASATENPNEKYLGKPTAFPLDLQSCFQPENSSMGPQFLPNLSNNSSTTQHYGNTTFMDPNPVGNYENSGTLDERISFSSFDETSNSMSYDMQTPSKQWAFQEVDDLQSVAFGFSRSAS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0723 232 Coils Coil 87 107 - -
Glsi11g0723 232 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 194 - -
Glsi11g0723 232 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Glsi11g0723 232 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0723 Glsi-ChrGlsi11 4568457 4569238 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0723 7 227 AS2 family AT3G58190 54.222 2.10e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi11g0723 LOB 1.1e-35 No_clan