LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi11g0715	ATGGCCAATTCAAGGGCTATGGAGTTCCAAAAACATGGTGTAAATTCTAAGCATGGTATTGTGCTTCTAAAGAATTGGGGGGTTGAGGGTATTCCAGAAAAAATTGTTGTTGGTTCTCATATTTGGGTTGGAGATCCAGAAGAAGTTTGGATTGATGGAGAAGTACTGCATATTAATGGAGAGGAAGTGGAGATTCAAACTAGTACTGGGAAGATGGTTGTTGCTCGTTTGTCAAAATTATATCCCAAGGATACAGATGCTCCTGCTGATGGAGTTGACGACATGACCAAGCTTGCATATTTGCATGAGCCAGGGGTGCTTCATAATTTAGCAACTAGATACAAGATGAATGATATATATACTTATACTGGAAATATTCTAATTGCCATCAATCCCTTTCAAAGTCTTCCACACTTGTATGCAACTGATATAATGAAACAGTACAAGGGAGCAACAATTGGAAATTTAAGCCCTCATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCAATGATTACTGAGGATAAAAGCAACTCTATTCTAGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACCAAAATGCTCATGCGTTACCTGGCATATCTGGGTGGACACACTGCAGTTGAAGGGTCAAGTGTTGAACAACAAGTTTTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTCAGAAATAACAATTCCAGCATCTCAACTAAGGAAAAGGAGAGATATAAGTTGGGAGATCCTAAATCATTTCACTACCTTAATCAATCCAATTGCTTTGAATTAGTTGGTGTTAATGCTGCTCAAGAGTATCTGAGAACGAAAAGAGCCATGGATATAGTGGGAATCAGTCAGGAAGAGCAGGATGCAATTTTCAGAGTTGTGGCTGCTATTCTTCATCTGGGAAACATTAAGTTTGGAAAAGCAGAAGAAGATTCATCAGTTTTAGCAGATGAAGAATCCAAGTTCCATCTCCAAATGGCAGCAGAACTTCTCATGTGTGATCCAATTGCTTTGGAAGATGCACTATGTAAGCGTGTGATGATAACGCCAGAAGAAATCATTAAGAGAAGTCTTGATCCTCTCGGTGCAACAGTTAGCAGGGATGGTTTAGCCAAGACATTATATTCTAGATTATTTGACTGGTTAGTCCAAAAAATTAATGTCTCCATTGGGCAGGATCCTAGCTCAAAATGTATCATTGGGGTTCTTGACATATATGGCTTTGAAAGCTTTGACACTAACAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTACAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATATACCCGGGAAGGGATTGAATGGAGCTACTTAGAATTTGTAGATAATCAAGATGTATTGGATCTCATTGAAAAGGTTTTTACATAA	1440	0.3861	MANSRAMEFQKHGVNSKHGIVLLKNWGVEGIPEKIVVGSHIWVGDPEEVWIDGEVLHINGEEVEIQTSTGKMVVARLSKLYPKDTDAPADGVDDMTKLAYLHEPGVLHNLATRYKMNDIYTYTGNILIAINPFQSLPHLYATDIMKQYKGATIGNLSPHVFAIAEAAYRAMITEDKSNSILVSGESGAGKTETTKMLMRYLAYLGGHTAVEGSSVEQQVLESNPVLEAFGNAKTVRNNNSSISTKEKERYKLGDPKSFHYLNQSNCFELVGVNAAQEYLRTKRAMDIVGISQEEQDAIFRVVAAILHLGNIKFGKAEEDSSVLADEESKFHLQMAAELLMCDPIALEDALCKRVMITPEEIIKRSLDPLGATVSRDGLAKTLYSRLFDWLVQKINVSIGQDPSSKCIIGVLDIYGFESFDTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREGIEWSYLEFVDNQDVLDLIEKVFT	479

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi11g0715	479	ProSiteProfiles	Myosin motor domain profile.	90	479	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Glsi11g0715	479	PRINTS	Myosin heavy chain signature	177	202	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Glsi11g0715	479	PRINTS	Myosin heavy chain signature	224	251	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Glsi11g0715	479	PRINTS	Myosin heavy chain signature	120	139	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Glsi11g0715	479	Gene3D	Kinesin motor domain	58	242	IPR036961	-
	Glsi11g0715	479	Gene3D	-	243	289	-	-
	Glsi11g0715	479	Pfam	Myosin N-terminal SH3-like domain	38	75	IPR004009	GO:0003774\|GO:0005524\|GO:0016459
	Glsi11g0715	479	Gene3D	Myosin VI head, motor domain, U50 subdomain	291	423	-	-
	Glsi11g0715	479	SMART	MYSc_2a	84	479	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Glsi11g0715	479	PANTHER	MYOSIN	245	476	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi11g0715	Glsi-ChrGlsi11	4509850	4519530	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi11g0715	30	476	Myosins gene family	AT1G08730	70.423	0.0	716

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