Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0715 ATGGCCAATTCAAGGGCTATGGAGTTCCAAAAACATGGTGTAAATTCTAAGCATGGTATTGTGCTTCTAAAGAATTGGGGGGTTGAGGGTATTCCAGAAAAAATTGTTGTTGGTTCTCATATTTGGGTTGGAGATCCAGAAGAAGTTTGGATTGATGGAGAAGTACTGCATATTAATGGAGAGGAAGTGGAGATTCAAACTAGTACTGGGAAGATGGTTGTTGCTCGTTTGTCAAAATTATATCCCAAGGATACAGATGCTCCTGCTGATGGAGTTGACGACATGACCAAGCTTGCATATTTGCATGAGCCAGGGGTGCTTCATAATTTAGCAACTAGATACAAGATGAATGATATATATACTTATACTGGAAATATTCTAATTGCCATCAATCCCTTTCAAAGTCTTCCACACTTGTATGCAACTGATATAATGAAACAGTACAAGGGAGCAACAATTGGAAATTTAAGCCCTCATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCAATGATTACTGAGGATAAAAGCAACTCTATTCTAGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACCAAAATGCTCATGCGTTACCTGGCATATCTGGGTGGACACACTGCAGTTGAAGGGTCAAGTGTTGAACAACAAGTTTTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTCAGAAATAACAATTCCAGCATCTCAACTAAGGAAAAGGAGAGATATAAGTTGGGAGATCCTAAATCATTTCACTACCTTAATCAATCCAATTGCTTTGAATTAGTTGGTGTTAATGCTGCTCAAGAGTATCTGAGAACGAAAAGAGCCATGGATATAGTGGGAATCAGTCAGGAAGAGCAGGATGCAATTTTCAGAGTTGTGGCTGCTATTCTTCATCTGGGAAACATTAAGTTTGGAAAAGCAGAAGAAGATTCATCAGTTTTAGCAGATGAAGAATCCAAGTTCCATCTCCAAATGGCAGCAGAACTTCTCATGTGTGATCCAATTGCTTTGGAAGATGCACTATGTAAGCGTGTGATGATAACGCCAGAAGAAATCATTAAGAGAAGTCTTGATCCTCTCGGTGCAACAGTTAGCAGGGATGGTTTAGCCAAGACATTATATTCTAGATTATTTGACTGGTTAGTCCAAAAAATTAATGTCTCCATTGGGCAGGATCCTAGCTCAAAATGTATCATTGGGGTTCTTGACATATATGGCTTTGAAAGCTTTGACACTAACAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTACAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATATACCCGGGAAGGGATTGAATGGAGCTACTTAGAATTTGTAGATAATCAAGATGTATTGGATCTCATTGAAAAGGTTTTTACATAA 1440 0.3861 MANSRAMEFQKHGVNSKHGIVLLKNWGVEGIPEKIVVGSHIWVGDPEEVWIDGEVLHINGEEVEIQTSTGKMVVARLSKLYPKDTDAPADGVDDMTKLAYLHEPGVLHNLATRYKMNDIYTYTGNILIAINPFQSLPHLYATDIMKQYKGATIGNLSPHVFAIAEAAYRAMITEDKSNSILVSGESGAGKTETTKMLMRYLAYLGGHTAVEGSSVEQQVLESNPVLEAFGNAKTVRNNNSSISTKEKERYKLGDPKSFHYLNQSNCFELVGVNAAQEYLRTKRAMDIVGISQEEQDAIFRVVAAILHLGNIKFGKAEEDSSVLADEESKFHLQMAAELLMCDPIALEDALCKRVMITPEEIIKRSLDPLGATVSRDGLAKTLYSRLFDWLVQKINVSIGQDPSSKCIIGVLDIYGFESFDTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREGIEWSYLEFVDNQDVLDLIEKVFT 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0715 479 ProSiteProfiles Myosin motor domain profile. 90 479 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0715 479 PRINTS Myosin heavy chain signature 177 202 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0715 479 PRINTS Myosin heavy chain signature 224 251 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0715 479 PRINTS Myosin heavy chain signature 120 139 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0715 479 Gene3D Kinesin motor domain 58 242 IPR036961 -
Glsi11g0715 479 Gene3D - 243 289 - -
Glsi11g0715 479 Pfam Myosin N-terminal SH3-like domain 38 75 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi11g0715 479 Gene3D Myosin VI head, motor domain, U50 subdomain 291 423 - -
Glsi11g0715 479 SMART MYSc_2a 84 479 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0715 479 PANTHER MYOSIN 245 476 - -
Glsi11g0715 479 FunFam Myosin 2 291 405 - -
Glsi11g0715 479 Gene3D - 424 478 - -
Glsi11g0715 479 Pfam Myosin head (motor domain) 92 241 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0715 479 Pfam Myosin head (motor domain) 243 476 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi11g0715 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 476 IPR027417 -
Glsi11g0715 479 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 36 85 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0715 Glsi-ChrGlsi11 4509850 4519530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0715 30 476 Myosins gene family AT1G08730 70.423 0.0 716