Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0713 ATGGCTGAGAAATTTTGTGGGAACGAGGAAGAAAAGGCTATGTTGGAATCTGTATTGGGTGCCGAAGCTGTTGCTTTCTTTATCTCGGCGGTTTCCAACAATGTATTTTCCGACGTTAGTGTTCCACCTGGCGGTGACTTGGGTGCCCAGCAGAGGTTGTGCCAGCTGGTTGAAGTGTCCAAGTGGAATTACGGCGTCTTTTGGCAGGTTGTTGGCTTGAAATCCGGTGGCTCTGCGTTGGTTTGGGGCGATGGGCACTTTCGGGATCCCAAAGGGGGCAATTCGAGTGGCGACAAGGAGGAGGTGAAAAGGCAGGTGCTGCACAAGCTTCGCGCCTGCTTTGGTGGCCCAAAAGAGGTTGACGGTGCGAGTTTGGATAGGGTCTCAGATGTGAATATGTTTTACTTAACTTCAATGTATCATATATTTGGTTTTGATTCGCCTTGTGGCCCTGGCAGTTCATTCAGATCTGGTAAATCAATTTGGGCTTCTGACCCTGACAGTTGTTTGAATCAATATGAATCAAGATCATTTCTGGGAAAATTGGCTGGTTTTCAAACAGTTGCTTTTGTACCTCTGAAAGCTGGGGTTGTGGAGCTGGGTTCAATGGAAATGATGCCTGAAGATCAGAGTATTTTGGAGATGGTCAAAACAACATTTGGGGAATCTAATTCTGGACAGGCAAAGGTATTTCCCAAGATTTTTGGGCGTGAACTAAGCCTTGGGGATACAAAATCTCAGTCCATAACTATAAGCTTCGCGCCCAAGGTGGAAGATGATTCTGGTTTCACTTCAGACTCTTATGAGGTACAAGCGCTAGGGACTAACCATGTTTATGGAAATTCTTCCAATGGGAATATAGGAGACAGTAACGAAGCAAAGTTGTTGCCACAATTAAATCAAATGATTGGTGGGAATTTTAATGCTCAAACAAGGGTTTCTTGTCTGGACCTAGGTAATGAAGACTTGTCGCCTCTTCCAGATGAGCGGAAGCCCAGAAAAAGAGGGAGAAAGCCTGCCAATGGTAGAGAGGAGCCACTGAATCATGTTGAAGCAGAGAGACAGAGACGCGAGAAGCTTAACCAGAGGTTTTACGCCTTAAGAGCTGTTGTTCCTAACATATCTAAGATGGACAAGGCATCTTTGCTTGGTGATGCCATTACCTATATCAATGACCTGCAGATGAAGATCAAAGTGTTGGAAGCGGATAAGGGCATGATAAACAAGAAGGACAAGCAGTTGCCATTGTCAGATATTGATTTTCAGGCTAGACAGGATGACGCGGTTGTGAGGTTGAGCTGCCCATTGGATATCCATCCTGTTTCTGGAGTTGTTAAAACGTTGAGGGAACATCAAATTGTAGCGCAAGAGTCAAGTGTTTCAACTGCAGATGATAAGGTCATTCATACATTCTCCATAAAAACTCAAGGCGGTGAGGGTGCTGCTGTACAGTTGAAGGAGAAGCTTGAAGCCTCCCTATCAAAAAATTAA 1491 0.45 MAEKFCGNEEEKAMLESVLGAEAVAFFISAVSNNVFSDVSVPPGGDLGAQQRLCQLVEVSKWNYGVFWQVVGLKSGGSALVWGDGHFRDPKGGNSSGDKEEVKRQVLHKLRACFGGPKEVDGASLDRVSDVNMFYLTSMYHIFGFDSPCGPGSSFRSGKSIWASDPDSCLNQYESRSFLGKLAGFQTVAFVPLKAGVVELGSMEMMPEDQSILEMVKTTFGESNSGQAKVFPKIFGRELSLGDTKSQSITISFAPKVEDDSGFTSDSYEVQALGTNHVYGNSSNGNIGDSNEAKLLPQLNQMIGGNFNAQTRVSCLDLGNEDLSPLPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYINDLQMKIKVLEADKGMINKKDKQLPLSDIDFQARQDDAVVRLSCPLDIHPVSGVVKTLREHQIVAQESSVSTADDKVIHTFSIKTQGGEGAAVQLKEKLEASLSKN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0713 496 MobiDBLite consensus disorder prediction 319 355 - -
Glsi11g0713 496 PANTHER MYC 45 492 IPR045084 GO:0003700|GO:0006355
Glsi11g0713 496 FunFam Transcription factor bHLH13 337 411 - -
Glsi11g0713 496 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 343 408 IPR036638 GO:0046983
Glsi11g0713 496 MobiDBLite consensus disorder prediction 323 355 - -
Glsi11g0713 496 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 344 393 IPR011598 GO:0046983
Glsi11g0713 496 Pfam Helix-loop-helix DNA-binding domain 348 394 IPR011598 GO:0046983
Glsi11g0713 496 Gene3D - 337 410 IPR036638 GO:0046983
Glsi11g0713 496 SMART finulus 350 399 IPR011598 GO:0046983
Glsi11g0713 496 CDD bHLH_AtAIB_like 341 418 - -
Glsi11g0713 496 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 50 220 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0713 Glsi-ChrGlsi11 4489186 4490676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0713 1 495 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 50.099 3.00e-164 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi11g0713 bHLH-MYC_N 1.2e-40 CL0161