Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0686 ATGGAGAATTCATTGGGGAGGCATGAAGGTGATCATGAGCTGAATTTTAAAGACACAGAGCTGAGGTTGGGATTGCCCGGCATCGATGAGCGGGAGAAACGTTGCAGTACTTGTGTTAGAAGCAAAAAGAGATGTTCGCTCTCGGAGGAGGAGTCAATAGCCAATACCCATATTTGTAATGGTTGTGACGCCTCAAATGATCAAGAGCATTTAGACAATGCCCCACCAGCAAAGGTACAAGTAGTGGGATGGCCACCTATCCCATCTTTCAGAAAGAACAGTCTACAACAAAACAATGATACAGAGGGAGGTGGAATAATGTACGTGAAAGTGAGCATGGCTGGCGCACCTTATTTGAGGAAGATACATCTCAAGGTTTACAAGAGCTACCCACAACTCCTCAAAGCCTTGCAAAATATGTTCAAGTGCACGTTTGGTGAGTATTCAGAAAGGGAAGGCTACAATGGATCTGAATATGTTCCTACTTATGAAGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTTCCATGGGATATGTTCAAGTCCTCCTGCAAGAGACTGAGAATCATGAAAGGATCAGAAGCTAAGGGGTTGGGTTGTTTATGA 609 0.4433 MENSLGRHEGDHELNFKDTELRLGLPGIDEREKRCSTCVRSKKRCSLSEEESIANTHICNGCDASNDQEHLDNAPPAKVQVVGWPPIPSFRKNSLQQNNDTEGGGIMYVKVSMAGAPYLRKIHLKVYKSYPQLLKALQNMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFKSSCKRLRIMKGSEAKGLGCL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0686 202 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 14 197 IPR003311 GO:0005634|GO:0006355
Glsi11g0686 202 Gene3D - 102 202 - -
Glsi11g0686 202 ProSiteProfiles PB1 domain profile. 106 193 IPR000270 GO:0005515
Glsi11g0686 202 SUPERFAMILY CAD & PB1 domains 101 192 - -
Glsi11g0686 202 Coils Coil 202 202 - -
Glsi11g0686 202 FunFam Auxin-responsive protein 101 202 - -
Glsi11g0686 202 Pfam AUX/IAA family 19 200 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0686 Glsi-ChrGlsi11 4331573 4332391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0686 109 199 B3 DNA Binding Superfamily AT2G46530 35.165 3.38e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Glsi11g0686 AUX_IAA 1.8e-54 CL0072