Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0683 ATGGCAAATAACTCTTCCGAGGCTCCCGCCGACGATTTCTTCGAACAAATCCTTGGACTCCCTGCTTTCGCTTCCATTGACTCCGGCTTTGCGGGAACCGATGGTGGCTTTGCGGCTACGGCTTCTTCGGCTCCCATGATGCTGCACCTCAACTCCAGTGATGCCACCGGCCACCTAGCCGCTCTTGGTGCTGGTGGTGGAAGTGATGCAGGTTGCGGCAGTAACTTCCATGGACCAGTGTACCAGTTAGGTCTGAGCTTGGAGCAAGGAAAAGGAGGAATTTTGAAGCTAGAGGAGGCTTCGGGGAGTGGCAAGCGGTTTCGCGACGATGTCGTTGATAGTAGAGCAAAGAATGTTTTTCATGGACAAACTATGCCTACTACCATTCCTACTGCTCCACATCCACCAGTAATGCGTCCAAGGGTGCGGGCTAGAAGAGGACAGGCCACAGATCCACACAGCATAGCTGAACGGTTGCGCAGAGAGAGAATAGCAGAAAGAATTAGGGCCTTGCAGGAACTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTAGATGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGCGGAGCTGCTGCAGTGGCACCACTGGTGACGGACATCCCATTTTCATCGGTTGAGGAAGATGGCACTGAAGGTGGAAGAAATCAACCAGTTTGGGAGAAGTGGTCGAATGATGGCACAGAAAGGCAGGTAGCTAAGCTTATGGAAGAAAATGTTGGGGCTGCCATGCAGTTTCTCCAATCAAAGGCTCTCTGCATCATGCCCATCTCACTGGCGTCAGCAATATACCACTCGCAACCACCGGACACCTCTAGTATAGTCAAGTCTGAAACTAATCCTCCGCCATAG 915 0.5104 MANNSSEAPADDFFEQILGLPAFASIDSGFAGTDGGFAATASSAPMMLHLNSSDATGHLAALGAGGGSDAGCGSNFHGPVYQLGLSLEQGKGGILKLEEASGSGKRFRDDVVDSRAKNVFHGQTMPTTIPTAPHPPVMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAAAVAPLVTDIPFSSVEEDGTEGGRNQPVWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQPPDTSSIVKSETNPPP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0683 304 SMART finulus 154 203 IPR011598 GO:0046983
Glsi11g0683 304 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 89 283 - -
Glsi11g0683 304 Pfam Helix-loop-helix DNA-binding domain 153 197 IPR011598 GO:0046983
Glsi11g0683 304 Gene3D - 143 205 IPR036638 GO:0046983
Glsi11g0683 304 FunFam Basic helix-loop-helix transcription factor 143 205 - -
Glsi11g0683 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Glsi11g0683 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 208 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0683 Glsi-ChrGlsi11 4321231 4325264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0683 76 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.574 1.14e-116 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi11g0683 HLH 1.1e-07 No_clan