Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0671 ATGACTCTCGTGCCTCCTCCCAGGGCAGGTCTGATATCTCCACCTTCTGACCCAAATGCAGCTCCCGAAAAACCTCCTGCCCACCGACCCAAGCCCCCAATGGATGAACAAGGGGGACAACGCGTGGCAGCTGACGGCGGCCACTTTAGTGGGCCTGCAAAGTGTTCCGGGCCTTGTCATCCTCTACGGCAGCATAGTGAAGAAGAAATGGGCCGTGAACTCGGCTTTCATGGCCCTCTACGCATTTGCAGCTGTGTTGGTTTGTTGGTTGGGGTGGTGCTATCAAATGTCTTTCGGGAAGGTTTTCCTTCCATTCCTTGGACGTCCAAACGTGGCCTTGGACCAGAAATATCTTTTGCGCCAAGCTTTTGCGGGAAACTTTCCCAACGCCACCATGATATACTTTCAGTTCATGGATGGTTATATAAAATGGGCATAATTGATTACTCTGGAGGCTTTGTTATTCACCTTTCTTCTGGGGTTGCTGGATTCACTGCTGCTTTCTGGGTGGGGCCAAGGGCAACGAAAGATAGGGAGAGGTTCCCTCCAAACAACATACTTCTCATGCTGGCTGGGGCTGGCCTACTATGGATGGGATGGACGGGATTCAACGGTGGAGATCCTTACACAGTCAGTATAGATGCATCTCTTGCCGTCCTTAACACGCACGTGTGCACCGCTGTGAGCTTGTTGACCTGGCTTCTCCTTGACATCCTATTCTTTGGGAAGCCTTCGGTGATTGGTGCTACTCAGGGCATGATCACTGGCTTGGTTTGCATCACCCCTGCTGCTGGAGTGGTGCAAGGTTGGGCAGCAGTCTTAATGGGAATAATGTCGGGAAGCATCCCATGGTACACAATGATGGTCCTGCACAAAGAAATTAGAATGCTCAAAATGGTGGATGATACTATGGCAATTTTCCACACCCATGCCGTGACAGAGTCAAATCGTCCAATGAAAAGTTCCCCCACTCTTCAACTTCCTTTGTTGGTTGACATGGAAGGTTAG 1008 0.506 MTLVPPPRAGLISPPSDPNAAPEKPPAHRPKPPMDEQGGQRVAADGGHFSGPAKCSGPCHPLRQHSEEEMGRELGFHGPLRICSCVGLLVGVVLSNVFREGFPSIPWTSKRGLGPEISFAPSFCGKLSQRHHDILSVHGWLYKMGIIDYSGGFVIHLSSGVAGFTAAFWVGPRATKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTVSIDASLAVLNTHVCTAVSLLTWLLLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAVLMGIMSGSIPWYTMMVLHKEIRMLKMVDDTMAIFHTHAVTESNRPMKSSPTLQLPLLVDMEG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0671 335 MobiDBLite consensus disorder prediction 1 27 - -
Glsi11g0671 335 Gene3D Ammonium transporter AmtB like domains 130 313 IPR029020 -
Glsi11g0671 335 PANTHER AMMONIUM TRANSPORTER MEP2 138 313 IPR001905 GO:0008519|GO:0016020|GO:0072488
Glsi11g0671 335 SUPERFAMILY Ammonium transporter 138 312 - -
Glsi11g0671 335 ProSitePatterns Ammonium transporters signature. 148 173 IPR018047 GO:0008519|GO:0016020|GO:0072488
Glsi11g0671 335 Pfam Ammonium Transporter Family 134 312 IPR024041 GO:0008519|GO:0016020|GO:0072488
Glsi11g0671 335 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0671 Glsi-ChrGlsi11 4234086 4236107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0671 139 312 Inorganic Solute Cotransporters AT2G38290 66.092 2.90e-76 236