Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0655 ATGGGTAATGCAGACTATGCGTACGCATCTTCGGGCACGAACGCGGAGTGTGGGCAGCGCGTGGCCATCCCACCGCCTCAACCATTTTTGAGGTCGCTCAAGTACTCTCTCAAAGAGACCTTCTTTCCGGATGACCCTTTAAGGCAGTTCAAGAACCAGCCAGCTTCTAAAAGGTTCGTGCTTGGCCTTCAGTACTTGTTCCCCATCTTTGAATGGGCACCTCGCTACTCTCTCCCGTTCTTGAAATCAGACCTTATAGCTGGCATCACCATCGCAAGCTTGGCTATTCCTCAAGGCATCAGTTACGCCCAGCTCGCCAACCTCCCTCCAATTCTTGGACTATATTCGAGCTTCATACCTCCATTTGTTTATGCCATGATGGGTAGCTCCAGGGATTTGGCAGTGGGAACGGTGGCGGTTGGATCGCTTCTCATGGGTTCTATGTTGGGGAGTGTGGTTAATCCCAATGACAACCCAAAGCTGTTTCTTCATCTTGCTTTCACCGCTACTTTCTTCGCCGGGATTTTGCAGGCTTCACTGGGTCTGTTTAGGCTAGGGTTTATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTGTGCCTGCAACAGCTAAAATCGATTCTTGGCCTCGAGCATTTCACCCATGAGGCCGATCTCGTCTCCGTAATGCGCTCTGTTTTCACCCAGACTCGCCAGTGGAGGTGGGAAAGCGCTGTGTTAGGATTTTGCTTCATTTTCTTCCTCCTCCTCACCAGATACTTCAGCAAAAGACAACCAAAATTCTTTTGGGTGTCAGCGATAGCCCCACTGACGTCCGTTACCTTGGGCAGTATTCTTGTTTATAGCACGCATGCCGAGAAACACGGTGTTCAAGTGATAGGAGAATTGAAGAAGGGCCTCAATCCGGTTTCCCTCACAAATCTGGTATTTGTGGCGCCTTATTTGAGCACAGCCATTAAGACTGGCCTTGTCACCGGCATCATAGCATTGGCGGAAGGAATAGCAGTAGGAAGAAGCTTTGCAATGTATAAGAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAGTTGGCTCTTTCTCCTCTTGCTACCTCACTACAGGGCCATTTTCGCGTTCGGCTGTGAACTATAATGCTGGATGCAAGACTGCAGCATCAAATATAGTAATGGCGATTGCAGTTATGTTGACACTCTTATTCCTGACACCCTTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCCATAATTGTGTCAGCAATGCTTGGCCTTATAGACTACCAAGCAGCCATCCATCTCTGGAACATTGACAAATTTGATTTTGTAGTCTGCATCACTGCCTATCTTGGCGTCGTCTTTGGCAGTGTTGAAATTGGCCTTGTCATAGCGGTTGCAATATCTGTACTTAGGCTACTTCTATTTGTTGCAAGGCCAAGGACATTTGTTCTGGGCAACATTCCAAATTCTGTGATATACAGAAATGTTGAACAGTATCCAAATGCAAACCATGTTCCTGGAATTCTAATTCTTGAGATTGATGCCCCAATTTACTTTGCCAACGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATTGACCAAGAGGAAGACAGGATTAAAGCTACAGGGGAGACAAGCTTGCAGTATGTTATAATGGATATGACTGCTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTCAACAAGGTTGCAAACAGAAGAGGCCTACAACTTATTTTGGTCAATCCCGGAAGCGAGGTGATGAAGAAACTGAACAAATCCAAGCTGCTTGAGGAAATAGGCCAGAAATGGATCTATCTAACAGTTGAAGAGGCTGTTGGAGGATGCAACTTTATGCTTCACACAGGCAAACCGAACACCGAGAAGGATGAATCGGAGGCTTGGAACAATATTGTGTGA 1977 0.4654 MGNADYAYASSGTNAECGQRVAIPPPQPFLRSLKYSLKETFFPDDPLRQFKNQPASKRFVLGLQYLFPIFEWAPRYSLPFLKSDLIAGITIASLAIPQGISYAQLANLPPILGLYSSFIPPFVYAMMGSSRDLAVGTVAVGSLLMGSMLGSVVNPNDNPKLFLHLAFTATFFAGILQASLGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFTQTRQWRWESAVLGFCFIFFLLLTRYFSKRQPKFFWVSAIAPLTSVTLGSILVYSTHAEKHGVQVIGELKKGLNPVSLTNLVFVAPYLSTAIKTGLVTGIIALAEGIAVGRSFAMYKNYHIDGNKEMIAIGTMNIVGSFSSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWNIDKFDFVVCITAYLGVVFGSVEIGLVIAVAISVLRLLLFVARPRTFVLGNIPNSVIYRNVEQYPNANHVPGILILEIDAPIYFANASYLRERITRWIDQEEDRIKATGETSLQYVIMDMTAVGNIDTSGISMLEEVNKVANRRGLQLILVNPGSEVMKKLNKSKLLEEIGQKWIYLTVEEAVGGCNFMLHTGKPNTEKDESEAWNNIV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0655 658 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Glsi11g0655 658 PANTHER SULFATE TRANSPORTER 30 637 IPR001902 GO:0016020|GO:0055085
Glsi11g0655 658 NCBIfam sulfate permease 68 631 IPR001902 GO:0016020|GO:0055085
Glsi11g0655 658 Gene3D STAS domain 492 637 IPR036513 -
Glsi11g0655 658 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Glsi11g0655 658 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Glsi11g0655 658 FunFam Sulfate transporter 31 492 638 - -
Glsi11g0655 658 Pfam STAS domain 513 631 IPR002645 -
Glsi11g0655 658 SUPERFAMILY SpoIIaa-like 514 633 IPR036513 -
Glsi11g0655 658 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0655 Glsi-ChrGlsi11 4107505 4111877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0655 11 657 Inorganic Solute Cotransporters AT4G02700 67.901 0.0 909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0655 11 4107505 4111877 Glsi11g0655 11 4107505 4111877 ECH