Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0584 ATGTCCATTCTCTTCTGCCTCCTCTTCCTCGCTTTCCCCTTTCCTTCCCTCTCTGCAAACGACACCGCACCTTGCCCTCTCAACTTCACCGTCCTTAGCGATGTCACTGGCGGCTCCACACCTCCGCTGGATGCCGGAACCCAGTGCCAGTACGTTCGCCAAGCGCTCCGTCTTGTTGAGTCCGATTACCTTCGTCGCAGTGACTTCTTCCTCCCTCCTCTCAACTCTTCCGAGTCATGCTGGCATGATTTTCAGTCTTACATCAATCAATTTGAGTCTAATTTTGATATTCGCTCCTCTTGTGGCTTCCAAACCAACTGGATCTCCCAGGGCTGCATGAACATCACCACCCGAGAACAATTCGAAGCCTTGGTTCCCAAGTCGGCTCTTCAAGATGTGCAGAGAAATTGTAATCAATCGCTTGAAAATAATTCCCCCTGCGCCCTCTGTACTACGAGCTTGTCGATTTTGCCAGCTTCGTACTTAACGGGACCATCGATTGGGAACCTCTCTGATTGTACGGCTTATCCATCAATTTATGCCGCTGCCTTCGCCAATCAGTACGGACCCACTGACACAGGTACCGCTAAGTGCTTATTCTCCCTGGATTTTGTGTCAGCGGCCTCCAGTGGTAAGAAACGAAAGCTTGTTATTGCGGTTGTTTCGATTGTTTGTTTATTGGGTTTGTCGTTCTTGATTGGTGGGTTGTGGCATAATTGGAGATCGAACAAGAAGAAGATGATGAGGATGAACAATATTAGCAGAACTGAAATGGGGTTTGTTTCGGGGTTAAATTCCTTGAATGAAAGTACCACTTTAATTAGGTTCACATTTGATGACATTAAGAAGGCAACTAAGAACTTCTCCAGGGACAGCATAATTGGGAGAGGAGGATATGGGAATGTGTATAAAGGGGTGCTGCCCGATGGGAGTGAAGTTGCATTTAAAAGATTCAAAAATTGTTCAGCTGCAGGTGATGCAAGTTTCACTCATGAAGTTGAGGTTATTGCAAGCGTTAGGCATGTAAACCTTGTTGCTTTGAGAGGATATTGCACTGCTACAACTCATTTAGAGGGTCACCAGAGGATTATCGTCTGCGATTTGATGAAGAATGGGAGTCTTCATGACCATTTGTTTGGGTCTATGGGGAGTAAACTCAGCTGGCCAACCCGTCAACAGATTGCACTAGGGACTGCAAGGGGATTGGCTTATTTGCATTATGGGGCTCAGCCAGCTATCATCCATAGGGATATAAAAGCCAATAATATACTTCTGGATGAGAAGTTTGAAGCAAAGGTAGCTGACTTCGGACTTGCAAAGTTCAACCCTGAGGGAATGACGCACATGAGCACTAGGGTAGCTGGAACAATGGGGTACGTTGCTCCCGAGTATGCATTGTATGGGCAGTTAACAGAGAGAAGTGATGTCTTTAGTTTTGGTGTTGTGCTTCTTGAACTTTTGAGTGGGAAGAAGGCTCTTCAAATGAACAATGATGGCCAACCCTCCGCACTAACTGACTGGGCATGGTCGTTAGTTAGAAATGGTAGACCTTTGGATGTAATCGAAGATGGTATGCCAGAACCCGGTCCCCCAGATGTTCTTGAGAAGTGTGTATTGGTTGCTGTGCTTTGTTCTCATCCACAGTTGTATGCCAGGCCAACGATGGACCAGGTTGTTAAAATGTTGGAGTCAGATCAATCAATATCGTCAATACCAGAACGACCAATTCCCCTTGTTGCTGACAGAATTGATATTGAGCGATCTGTGAGCAGTAGTGGCTCAGGTCAGCTTTCTAGTCCAACTGGTTATCAAGCATATACATTTGAAAGTGACCGCCTTTCTTCTAATTCTAAGGAAGAAGGAAGTTCAGGTTCCGGAGTACGAGTGTAG 1890 0.4603 MSILFCLLFLAFPFPSLSANDTAPCPLNFTVLSDVTGGSTPPLDAGTQCQYVRQALRLVESDYLRRSDFFLPPLNSSESCWHDFQSYINQFESNFDIRSSCGFQTNWISQGCMNITTREQFEALVPKSALQDVQRNCNQSLENNSPCALCTTSLSILPASYLTGPSIGNLSDCTAYPSIYAAAFANQYGPTDTGTAKCLFSLDFVSAASSGKKRKLVIAVVSIVCLLGLSFLIGGLWHNWRSNKKKMMRMNNISRTEMGFVSGLNSLNESTTLIRFTFDDIKKATKNFSRDSIIGRGGYGNVYKGVLPDGSEVAFKRFKNCSAAGDASFTHEVEVIASVRHVNLVALRGYCTATTHLEGHQRIIVCDLMKNGSLHDHLFGSMGSKLSWPTRQQIALGTARGLAYLHYGAQPAIIHRDIKANNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALQMNNDGQPSALTDWAWSLVRNGRPLDVIEDGMPEPGPPDVLEKCVLVAVLCSHPQLYARPTMDQVVKMLESDQSISSIPERPIPLVADRIDIERSVSSSGSGQLSSPTGYQAYTFESDRLSSNSKEEGSSGSGVRV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0584 629 ProSiteProfiles Protein kinase domain profile. 288 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0584 629 SMART serkin_6 288 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0584 629 MobiDBLite consensus disorder prediction 588 629 - -
Glsi11g0584 629 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Glsi11g0584 629 SUPERFAMILY Protein kinase-like (PK-like) 271 578 IPR011009 -
Glsi11g0584 629 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 604 - -
Glsi11g0584 629 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 249 367 - -
Glsi11g0584 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Glsi11g0584 629 CDD STKc_IRAK 294 563 - -
Glsi11g0584 629 Gene3D Phosphorylase Kinase; domain 1 249 367 - -
Glsi11g0584 629 Gene3D Transferase(Phosphotransferase) domain 1 369 573 - -
Glsi11g0584 629 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 369 570 - -
Glsi11g0584 629 Pfam Protein kinase domain 289 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0584 629 Pfam SPARK 21 157 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0584 Glsi-ChrGlsi11 3705980 3707869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0584 12 617 Receptor kinase-like Gene Family AT2G48010 65.846 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Glsi11g0584 Pkinase 3e-42 CL0016