Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0576 ATGGCTGGTAGTAATGAAGTCAACCTCAGTGAATCCAAGAGTGTTGTTCCGCTCAATACTTGGGTACTTATCTCCAATTTCAAGTTGGCCTACAATCTACTTAGACGTGCCGATGGAACATTCAACAGAGAGTTGGCAGAGTTCCTTGACCGGAAGGTAACTGCCAATACAGTTCCGGTTGATGGGGTATTCTCTTTCGACCATGTTGATCGAAACACCGGCCTCTTTAGTCGGGTGTATCAACCAGCTCCTGAAAATGAGGCTCAGTGGGGCATTATAGAGCTTGAAAAGCCCTTGAGCAACACCAAGATTGTCCCCGTCATAATTTTCTTCCATGGTGGAAGTTTCTGTCACTCCTCTGCTAATAGTGCTATCTATGACACTTTCTGCCGCCGTCTTGTGAACATTTGTAAGGCTGTCGTTGTCTCTGTGAATTACCGCCGATCTCCAGAACATCGTTATCCATGTGCATACGAAGACGGGTGGGCTGCACTTAAGTGGGTTAAATCAAGAACATGGCTTCAGAGCGGAAAGGATTCCAAGGTTTATGTATACTTGGCTGGTGACAGTTCTGGCGGTAACATTGTTCACCATGTGGCGGCGAGGGCTGCCAAGGAAGATTTGGAGGTATTGGGTAATATTCTCCTCCATCCATTGTTTGGCGGGGAGAAGCGAACGGAGTCGGAGAAGAGACTAGATGGAAAGTTCTTTGTGAGATTGCAAGACCGTGACTGGTATTGGAGGGCTTTTCTGTCTGAAGGGGAAGATAGAGATCATCCAGCTTGCAACCCATTTGGACCCAGGGGGAAAAGCCTTGCAGGACTCAAGTTCCCTAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTGTCCAAGATTGGCAATTGGCATATGTGGAAGGTCTCGAGAATTCTGGCCAAGACGTCAAACTTCTTTACCTAAAGGAGGCCACAATTGGTTTCTACTTCTTACCAAATAATGATCATTTCTATTGCCTCATGGAGGAGATAAACAAGTTCGTCAATTCTAACTGTTAA 1035 0.4599 MAGSNEVNLSESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVTANTVPVDGVFSFDHVDRNTGLFSRVYQPAPENEAQWGIIELEKPLSNTKIVPVIIFFHGGSFCHSSANSAIYDTFCRRLVNICKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSRTWLQSGKDSKVYVYLAGDSSGGNIVHHVAARAAKEDLEVLGNILLHPLFGGEKRTESEKRLDGKFFVRLQDRDWYWRAFLSEGEDRDHPACNPFGPRGKSLAGLKFPKSLVCVAGLDLVQDWQLAYVEGLENSGQDVKLLYLKEATIGFYFLPNNDHFYCLMEEINKFVNSNC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0576 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Glsi11g0576 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Glsi11g0576 344 PANTHER ARYLACETAMIDE DEACETYLASE 43 315 - -
Glsi11g0576 344 FunFam Gibberellin receptor GID1 1 342 - -
Glsi11g0576 344 SUPERFAMILY alpha/beta-Hydrolases 58 341 IPR029058 -
Glsi11g0576 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Glsi11g0576 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0576 Glsi-ChrGlsi11 3674311 3675969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0576 1 342 Carbohydrate Esterase AT3G63010 77.259 0.0 569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2487 02 74794664 74797951 Glsi11g0576 11 3674311 3675969 CCT
Glsi11g0576 11 3674311 3675969 Glsi11g0576 11 3674311 3675969 ECH
Glsi02g2487 02 74794664 74797951 Glsi11g0576 11 3674311 3675969 ECH