Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0570 ATGGAGATTAAAACTTGCTTATTAGCGTTTGTGGTAGTCGTTGGTGTTGTGGGGGTTTGTGAAGGAGGCAGTCTTAGGAAGAACTTTTACCGGACGTCCTGTCCTAATGCGGAACAGATTGTTAAGAACGTAACTCAGCAGCGTGTCCCTGGAAGGCCCTCTTTGCCCGCAAAGTTGCTGAGAATGCATTATCACGACTGCTTTGTTAGGGGTTGTGATGGGTCGGTTTTGTTGAACTCCACGGCTGACAATTCTGCAGAGAAGGATGCACTAGCAAATCTAAGTTTGGAAGGCTTTGAGGTCATAGATGACATAAAAGCAGCAGTGGAGGCGCAATGTCCAGGAATAGTATCCTGTGCTGACATAGTCGCATTAGCTGCCAGGGACGCTGTTTCCTTCCCCTTCAATAAACCAATGTGGGACGTTCTTACTGGTAGAAGAGATGGCACAGTATCCAAGAGCTCAGAAGCCTCCGCCAATCTCCCCTCGCCTTTCTTCAACTTCACGCAACTCATACAAAGCTTCGCTAGCAAAAAACTCACGGAGCATGATTTGGTTGTATTATCAGGTGCCCACACAATTGGAACAGGGCATTGCAACTTGTTCAGTAACAGACTCTTCAACTTCTCTGGGAAAGGTGATCAAGATCCTTCTTTGAACTCCACCTATGCTGACTTCTTGAAGACTAAATGCCAGAGCCTCACTGACTTTACCACAACTGTGGAAATGGATCCTGGAGGCTCCACCAGCTTTGACTCCAACTACTATGCTAACCTTCTTCTGAACCAGGGTCTCTTCAAATCAGATGCTTCTCTTCTCACAGACAAGACTTCAAAAGTTACTGTCACCCAGTTGGTCAAACAAGACCGTTTCTTCAAGGAGTTCGGGCAGTCAATGCAGAGAATGGGAGCCATTGAAATCCTTACGGACACGGCCGGCGAAATTAGGAAGAACTGTGGGATATCAACGGTTAGAAATTACCGGCGGTTCTTTAATGATTTCAAAGCAGCAATCTTATCCCATCATCAGGTAGTCGCTGGAGTTCTTTTCGTTTGCTCCACTTTCCTACTAGCGCAAGTTAAAGGTATTCCAGAACCAAAACCTTACCACGCTTCAATTCTACAAGCTACTCATTCTTTTTCTCCTTCTTCAATGTTCTCCTCCGTACAAAAACCATATACCTGCTAG 1188 0.4571 MEIKTCLLAFVVVVGVVGVCEGGSLRKNFYRTSCPNAEQIVKNVTQQRVPGRPSLPAKLLRMHYHDCFVRGCDGSVLLNSTADNSAEKDALANLSLEGFEVIDDIKAAVEAQCPGIVSCADIVALAARDAVSFPFNKPMWDVLTGRRDGTVSKSSEASANLPSPFFNFTQLIQSFASKKLTEHDLVVLSGAHTIGTGHCNLFSNRLFNFSGKGDQDPSLNSTYADFLKTKCQSLTDFTTTVEMDPGGSTSFDSNYYANLLLNQGLFKSDASLLTDKTSKVTVTQLVKQDRFFKEFGQSMQRMGAIEILTDTAGEIRKNCGISTVRNYRRFFNDFKAAILSHHQVVAGVLFVCSTFLLAQVKGIPEPKPYHASILQATHSFSPSSMFSSVQKPYTC 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0570 395 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PANTHER PEROXIDASE 25-RELATED 12 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 Gene3D Peroxidase, domain 2 162 302 - -
Glsi11g0570 395 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 FunFam Peroxidase 28 165 - -
Glsi11g0570 395 FunFam Peroxidase 162 302 - -
Glsi11g0570 395 Pfam Peroxidase 46 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Glsi11g0570 395 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g0570 395 Gene3D - 28 320 - -
Glsi11g0570 395 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0570 Glsi-ChrGlsi11 3645767 3647979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0570 6 322 Peroxidase AT1G05260 52.000 1.28e-113 333