Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0544 ATGTATTCTTTTAGTTTTAATTTAACAGTATATATAAAGGTTGACATTAAGTCAGCTTGCAAAGTGGACTGTGTTTTAGCAGCAAGAAGTAAGAAACTCAGAAAGTGCCAAGAGCTGCGATTGTATTTCAATAGAGCCGACTATGATGAAAAGCACACAACTCAGCTCTCTGTCACTGTGTGCTTTATGTTCTCTGTGTTGGTTTGCATGGAAAGAAGGAAGGAAGGAGAAGAAGTGGGGATAGATTCTTGTGGATTGGCTCCAGAAACTGCTGCTTTAGCTTCCCAAAAGATACAGCTTCATTCAGCAGAAAGACCGGATACCGTCCTAACTCTGCTCAGAGCAAATGGGTTCTCAAAATCCCAGATTTCAAATGTTGTCCGGAAGCGCCCATTGCTCCTGTTAGCTAACCCCAATGATACCCTTTTGCCGAAGCTTGAATTTTTTCACTCTATAGGGATTTCCAGTGCTGACCTTGCTAGAATTCTTGCTGCTGACCCAACCATTTTGACGAGAAGCTTGGAGAAACAGATAATACCTTCTTATAATTTCCTGAAAAGTGTGTTGCTTTCAGATGAAAAGGTTGTTGCTGCCTTAAAGCGCACGTCATGGGTTTTTCTTGAGGACCATTCCAAGAAGCTCATACCAAATCTTTCCATCCTGAGAGAAGCAGGTGTGCCAGAATCATGTATTGCATTGTTGCTTGCTCATTTTCCGGAGGCGTTAATTCAAAAGAAGGAACAATTTACAAAGATTGTCGAAGAGATTAAGGAAATGGGATTCGATCCAACTAAGTCGACATTCGTGTTAGCAATCCATGTAATCGCAGGTAATAAGTCGATATATAATCGCTGTTACGAGGTTTATCAGAGGTGGGGTTGGTCCGAGGATGACATTCTATTGGCATTCAAGAAGCACCCGAATTGTATGATTTTGTCGGAGGAAAAAATAATGAAGACAATGGATTTCTTTGTGAACAAGATGGGTTGGCCTTCGGGGATGATTGCCGGATGCCCTGTGGTATTATTTTTCAACTTGGAGAAGAGAATAAAGCCCAGGTGCTCAGTAGTTCAGGTTTTACGGATGAAAGGGTTGATTAAGAAAACTCTGAGCTTGTCCACCGTCCTCTTACCCGAGGAGAAGCGTTTTGTGGAGAAGTTCGTGACCAAGTATGAACAGCAAGTGCCTGAATTGTGGAGTGTCTATCAGAGGAAAGTGGATTTTAAGAGTGTGATTTGA 1239 0.4189 MYSFSFNLTVYIKVDIKSACKVDCVLAARSKKLRKCQELRLYFNRADYDEKHTTQLSVTVCFMFSVLVCMERRKEGEEVGIDSCGLAPETAALASQKIQLHSAERPDTVLTLLRANGFSKSQISNVVRKRPLLLLANPNDTLLPKLEFFHSIGISSADLARILAADPTILTRSLEKQIIPSYNFLKSVLLSDEKVVAALKRTSWVFLEDHSKKLIPNLSILREAGVPESCIALLLAHFPEALIQKKEQFTKIVEEIKEMGFDPTKSTFVLAIHVIAGNKSIYNRCYEVYQRWGWSEDDILLAFKKHPNCMILSEEKIMKTMDFFVNKMGWPSGMIAGCPVVLFFNLEKRIKPRCSVVQVLRMKGLIKKTLSLSTVLLPEEKRFVEKFVTKYEQQVPELWSVYQRKVDFKSVI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0544 412 FunFam Mitochondrial transcription termination factor-like 174 395 - -
Glsi11g0544 412 Pfam mTERF 239 383 IPR003690 GO:0003690|GO:0006355
Glsi11g0544 412 Pfam mTERF 110 263 IPR003690 GO:0003690|GO:0006355
Glsi11g0544 412 PANTHER CGI-12 PROTEIN-RELATED 82 392 IPR003690 GO:0003690|GO:0006355
Glsi11g0544 412 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Glsi11g0544 412 SMART mt_12 332 366 IPR003690 GO:0003690|GO:0006355
Glsi11g0544 412 SMART mt_12 232 262 IPR003690 GO:0003690|GO:0006355
Glsi11g0544 412 SMART mt_12 196 227 IPR003690 GO:0003690|GO:0006355
Glsi11g0544 412 SMART mt_12 124 155 IPR003690 GO:0003690|GO:0006355
Glsi11g0544 412 SMART mt_12 160 191 IPR003690 GO:0003690|GO:0006355
Glsi11g0544 412 Gene3D Transcription termination factor 3, mitochondrial 170 405 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0544 Glsi-ChrGlsi11 3529523 3532450 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi11g0544 mTERF 2.4e-24 No_clan