LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi11g0534	ATGTCCTCAGAAGTAGTAGTCGTGGAGAACAGTACTGATAACAATGAAGGAATAAGGCAGAACCAGCAAGCGTCTCAGGATCATCATCCTCAACTCACGGGCAAGAAACTTTCTTGGCAAAAGTTGCGTAGAAATGACTCTCTTGACATGGAATCTCGTAGCTACTCCAATCCCAGCGGACATTCCTCTAAGGGGCCACCTTTGTCGGTGATCATGCATCTAGCGTTTCAAAGTATCGGAATAGTGTACGGAGACATCGGAACGTCGCCGCTTTACGTGTACGCCAGTACCTTCACCGATGGAATCAAGCATAACGATGACATTTTGGGCGTCCTTTCCTTGATTCTTTACACCATCACTCTCATCCCTCTCGTCAAATACGTTTTCATTGTTTTACGGGCCACCGACCACGGCAACGGAGGGACGTTCGCTTTGTACTCTTTGATATGTCGTTATGCGAAAGTGGGGCTCATCCCAAATCAGCAATTGGAAGATGCGGAAGTTTCTAATTATCAGTTAGAGTTGCCCAAGAGCAGCACTGTGAAGAGGGCTTCAAGGATAAAGTCTAAGCTAGAGAATAGCAACTTTGCCAAGCTATTCCTTCTGTTTGCTACCATGCTTGGTACTTCTATGGTCATTGGTGATGGCGTTCTCACTCCTTGCATTTCTGTTTTATCCGCTGTGGGAGGTATCAAGCAGGCTGCTTCTGCGATAACTGAAGATTGGGTTGTTATAATATCAATAGCAATATTGGTGTGCCTTTTCGTGGTTCAAAGATTTGGAACTGATAAAGTGGGCTACAGTTTTGCTCCCATTATCTGTGTATGGTTCACCTTCATCGGAGGCATCGGTATTTACAATTTCATCAAGCATGATCCAACAGTCCTCAAAGCATTAAATCCCAAATACATCGTAGATTATTTCAGAAGGAACAAGAAAGATGCTTGGGTTTCCCTTGGTGGCGTTGTGTTGGCCATAACAGGAACTGAAGCACTATTTGCTGATGTTGGACATTTCACTGTTCGGTCCATACAAATAAGTATGTGCTCTGTCACATACCCTGCTCTTATATTGGCCTACACTGGACAAGCCTCCTTTCTTCGCAAAAACAATGATCTCGTGGCAGACACCTTTTACAAGTCCATACCACATCATTTATATTGGCCAATGTTTGTGATTGCTGTTATGGCAGCAATCATAGCTTCTCAAGCCATGATCTCTGGGACTTTCTCTATAATCCAACAATCCCTCGCACTTGGGTGTTTTCCTCGGGTGAAAATTGTACACACATCAGCCAAGTATGAAGGACAAGTTTACATCCCTGAAATTAATTACATCTTGATGATAGCTTGTGTTGCTGTCACTGCTGGCTTTAAAACCACTACCAAAATAGGAAATGCCTACGGAATAGCTGTGGTATTTGTAATGACGCTTACATCAGCTTTACTTGTGCTCATCATGACCATGATATGGAAAACCCACATGCTTCTTGTTATTAGCTATGTGGTTATAATTGGTTCTGTTGAGTTCATGTACTTGAGCTCAGTATTATACAAATTTGACCAAGGAGGGTATCTTCCTCTTGCCTTTGCTGCGGTGCTAATGTCCATCATGTACATTTGGAACAATGTTTATCGAAGGAAGTACTATTATGAGCTTGATCATAAGATTTCTCCAGAGAAGCTTAAAGAAATTGCTGCTGACACTGAGGTTTGTCGAATACCTGGTTTGGCCATATTCTACTCTGAGCTTGTTCAAGGCATCCCGCCCATTTTCAAGCATTATGTGGCAAATGTGCCTGCATTGCACTCTGTGCTTGTCTTTGTGTCCATCAAGTCCTTACCTATTAGCAAAGTTGCTACGGAAGAGCGATTTCTTTTTCGCCGAGTAGAACCTAAAGAACTCAATGTGTTCCGTTGTGTTGCAAGATATGGATACACGGACGTGCGCAACGAACAGGAGCCTTTTGAGAGACTCTTGGTTGAGAGGTTGAAAGAGTTTATTGCAAGAGAATTTTTGGTGACACAAAGTGTGCTCCAGAATGGTCAGACTGAAGAGAAATTAGATGCTGGTGATGGAGTAGAAGAAACTAGTAATGAAGAGAGGCAACAAGAGGGTATTAATAGAGAGATCGAGGCAGTTGAAAAAGCATTACGAGCAGGGGTAGTTCACTTAATTGGTGAGAACGAGGTGATTGCTAGCGAAGGAGCTGGCATAGGGAAGAAGATTTTGATAGATTATGCTTACAATTTTCTAAAGAAAAACTTGAGACAGAGTGACAAAGTGTTTGATATTCCTCATAAGCGTATGGTCAAAGTGGGAATGACCTACGAACTTTAG	2340	0.4265	MSSEVVVVENSTDNNEGIRQNQQASQDHHPQLTGKKLSWQKLRRNDSLDMESRSYSNPSGHSSKGPPLSVIMHLAFQSIGIVYGDIGTSPLYVYASTFTDGIKHNDDILGVLSLILYTITLIPLVKYVFIVLRATDHGNGGTFALYSLICRYAKVGLIPNQQLEDAEVSNYQLELPKSSTVKRASRIKSKLENSNFAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKQAASAITEDWVVIISIAILVCLFVVQRFGTDKVGYSFAPIICVWFTFIGGIGIYNFIKHDPTVLKALNPKYIVDYFRRNKKDAWVSLGGVVLAITGTEALFADVGHFTVRSIQISMCSVTYPALILAYTGQASFLRKNNDLVADTFYKSIPHHLYWPMFVIAVMAAIIASQAMISGTFSIIQQSLALGCFPRVKIVHTSAKYEGQVYIPEINYILMIACVAVTAGFKTTTKIGNAYGIAVVFVMTLTSALLVLIMTMIWKTHMLLVISYVVIIGSVEFMYLSSVLYKFDQGGYLPLAFAAVLMSIMYIWNNVYRRKYYYELDHKISPEKLKEIAADTEVCRIPGLAIFYSELVQGIPPIFKHYVANVPALHSVLVFVSIKSLPISKVATEERFLFRRVEPKELNVFRCVARYGYTDVRNEQEPFERLLVERLKEFIAREFLVTQSVLQNGQTEEKLDAGDGVEETSNEERQQEGINREIEAVEKALRAGVVHLIGENEVIASEGAGIGKKILIDYAYNFLKKNLRQSDKVFDIPHKRMVKVGMTYEL	779

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi11g0534	779	MobiDBLite	consensus disorder prediction	688	706	-	-
	Glsi11g0534	779	MobiDBLite	consensus disorder prediction	1	33	-	-
	Glsi11g0534	779	MobiDBLite	consensus disorder prediction	685	706	-	-
	Glsi11g0534	779	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	47	778	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi11g0534	779	MobiDBLite	consensus disorder prediction	1	39	-	-
	Glsi11g0534	779	Pfam	K+ potassium transporter	75	648	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi11g0534	779	NCBIfam	potassium uptake protein	74	778	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi11g0534	Glsi-ChrGlsi11	3460477	3464774	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi11g0534	26	779	Inorganic Solute Cotransporters	AT4G13420	55.913	0.0	872