Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi11g0515 | ATGTCCTCTGCAACTTGGATCACTTCCCTCTCATGTTCGTCCCCTGTAAAACAAACCTCGGGGGTTACATTCCTTTCAACTCTACCTCAATGGTTAAGATTCGTTTTCCTCTTCCCATGCCCTCAGAGAGCTCTCTTGTCTGCTGTTGACGTTGTACTCCTGCTCGTCCTCTTCGTGTTTGCCCTCAAAAAGCTCTATTCTAGGTTCACCGCCAATGGTGGCCCCACTTCTGAACTTAACAAGCCCCTTATCCGACATAACAGAGCTTTTGTCAGAACTAATTTATGGTTCAAGCTAACTCTAACTGCAACAGTTGTTTTGGCTATATTGTACACCGTCGCCTGCATTCTGGTATTTGGCAGAGCCACCCAAGTGCCATGGAAGCTAGTTGATGGACTGTTCTGGCTAGTTCAGGCTGTAACTCATTCGGTACTCGCAATCTTAATTATCCATGAAAAAAGATTCGAAGCTATTTCTCACCCGATATCACTTCGAATCTTTTGGGTTGCAAACTTCATTCTCATTTCTTTGTTCGCAGCGTCTGGGGTTATACGTTTGGTCTCTGTAGAAGAAACCGACGACTTCAGCTTTAAGATGGATGACATAGTCTCTTTCATTTCTCTCCCTCTGTCATTTTTTCTCCTTTTTGTTGCGATTAAAGGATCCAGTGGCATTAGGTCGACCCAAGAAGCGCAGCCGCTCATGGATGAGGAAACAAAGCTATACGATCCTAGTCTGAGCAAATCGAACGTTACTGGCTTTGCTTCAGCTTCTTTTGTATCCAAGGCCTTTTGGCTATGGATAAATCCCTTGTTGAGTAAAGGGTACAAGTCGCCTCTGAAGATTGATGAAGTTCCATTCCTTTCTCCGGAACATAGAGCTGAAAGGATGTCAGTACTCTTTGAATCGAAATGGCCTAAACCACGAGAAAGGTCGAACCACCCAGTTCTAACCACATTGATCCGATGTTTCTGGAAGGAAGCAGCCTTCACTGCCTTCCTTGCGGTTGTTCGGCTTTGTGTCATGTTTGTAGGGCCGGTTCTTATACAAAGTTTTGTTGATTTCACAGCAGGGAAGAGAAGCTCTGTATATGAAGGATACTACCTCGTGCTAATTCTCCTCATTGCCAAATTTATAGAAGTTTTGGCCACTCACCATTTCAACTTCAACTCTCAGAAGCTTGGAATGCTTATCCGATGCACTCTCATCACTTCATTGTACAAGAAGGGGCTAAGGCTATCGTGCTCTGCTCGGCAGGATCACGGTGTTGGAACTATTGTGAATTACATGGCTGTCGATGCTCAACAACTCTCTGATATGATGCTACAGCTTCATGCCATTTGGATGATGCCGTTTCAAGTTGGTATTGCCTTATTTCTGCTTTACAAATACTTAGGTGCCTCAGTCCTCACGGCTCTGATTGGAATTCTTGGGATTCTTGTGTTTGTTGTGTTTGGTACTCGAAGAAACAACCGTTTCCAATTTAATGTGATGAAGAATCGTGATTCAAGAATGAAAGCTGTGAATGAGATGCTCAATTACATGCGTGTGATCAAGTTCCAGGCATGGGAAGAACATTTCAACAAGAGAATCATGGATTTCCGTCAATCAGAATTTGAATGGCTCTCCAAGTTTATGTTTTCAATTTCTGGCAATATTGCTGTGATGTGGAGCACACCACTATTGATATCAACTCTCACGTTCGCTACGGCAATTTTGCTTGGAGTTCCACTTGATGCAGGGACGGTTTTCACCACAACAACAATCTTTAAAATCTTGCAGGAACCCATTAGGACGTTCCCACAGTCTATGATCTCTCTCTCACAAGCAATGATATCACTTGGGAGGTTGGATAGGTACATGATAAGTAGGGAATTATCGGATGATTCAATAGAGAAAGAGGAAGGGTGCGGTGGACGAACTGCTGTGGAGGTGAAAGATGGGGTCTTTTGTTGGGATGATGATAGCTGGGAGCACGACTTGAAAAACATTAATTTGGAGATCAAAAAGGGGGAGCTGACGGCTATAGTTGGGACTGTGGGTTCGGGAAAGTCTTCTCTCCTTGCATCAGTTCTTGGGGAGATGCACAAAATTTCTGGAAAGGTACGGGTTTGTGGGAGTACTGCCTATGTCGCACAAACATCATGGATTCAAAATGGAACCATTCAAGAAAACATCCTCTTTGATTTACCAATGAACAGACAGAAGTACTATGAGGTTATCAGAATTTGCTGCTTGGAGAAGGACTTTGAAATGATGGAGTATGGGGATCAGACAGAGATCGGAGAGCGTGGCATCAACCTAAGTGGAGGCCAGAAGCAGCGGATACAACTTGCCAGGGCTGTATATCAAGACTGTGATATCTATCTTCTTGACGATGTCTTCAGTGCTGTTGATGCCCATACTGGCTCCGAAATATTTAAGGAATGTGTGAGGGGAGCTCTAAAAGGCAAGACCATTATTCTTGTGACACACCAAGTAGACTTCTTGCATAATGTTGATCTTATATTAGTGATGAGGGATGGAATGATAGTCCAATCAGGGAAGTACAATGATCTGCTAGATTCGGGAATGGATTTTGGAGCTCTGGTAGCTGCACACGAAACTTCTATGGAGCTAGTAGAACAGAGTGCAGTCATGCCAGGGGAAAGTTCCCCCAAACCATCAAAGTCTCCAAAGGAAACTTCAAATCATTTTAGGGAAACAAATGGTGAAAGCAATTCTCCAGACCAGCCCACGGCTGGCAAGGAAAGTTCTAAACTCATCAAAGAAGAGGAGAGAGAAACTGGCAAAGTGAGCTTACATATATATAAACTTTATTGTACTGAGGCTTTTGGGTGGTGGGGCATTACAGGAGTATTGCTCCTTTCTTTGTTATGGCAAGCATCTCTGATGGCGGGGGATTATTGGCTGGCATATGAAACCTCAGAAGAGCGTGCTCATTTGTTTAATCCTTCTCTGTTTATCTCCGTCTACGCAATTATTGCTGTAGTTTCAGTTGTTTTGGTGGTGATAAGAGCCTTCTCCTTTACCATCTTGGGGCTCAAGACAGCACAAATTTTCTTCACACAAATTCTTCATTGCATCTTGCATGCCCCCATGGCTTTCTTTGACACTACACCTTCGGGAAGAATTTTAAGTAGGGCATCCACTGATCAGACCAATGTTGATGTCTTTCTCCCCTTGTTTGTGGGCATTGTTATTGCCATGTACATCACAGTGCTCGGCATCTTCATCATCACATGTCAAAACAGTTGGCCGACAGTTTTCTTGTTGATTCCTCTGATTTGGTTGAATATATGGTACCGGGGTTATTTCCTTGCTTCATCTCGTGAATTGACTCGCCTGGATTCAATTACAAAAGCACCTGTCATTCATCACTTCTCTGAAAGCATTTCGGGGGTCATGACAATCCGTGCATTCAGAAAGAAGGAAAAGTTTTGTGAAGAAAATGTTAAACGAGTGAATGCTAATTTGCGAATGGATTTCCACAACAACGGTTCCAATGAGTGGTTGGGTTTCCGTTTAGAATTGCTTGGAAGCTTGGTTTTTTGCTTTTCTGCTTTGTTCATGATCCTTTTACCGAGCACTATCATAAAGCCAGAAAACGTAGGTCTGTCTCTCTCTTATGGATTGTCCCTAAATGCTGTCATGTTCTGGGCTATATACATGAGCTGCTTCATTGAAAACAAAATGGTATCTGTTGAGAGGATTAAGCAGTTTACAAAAATTCCACCAGAAGCAGCATGGAATATTAAAGATCGTCTGCCTCCTCCTAATTGGCCCGCCCATGGCAATGTCAATATCAAAGACTTGCAGGTCAGATATCGTCCAAACTCTCCTCTGGTTCTTAAAGGCATTACTCTAAGCATTAGAGGGGGAGAGAAGATTGGTGTTGTTGGTAGAACAGGGAGTGGAAAATCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAACCTTCAGGAGGGAGAATAATCATTGACGACATCGACATAACTGCCTTAGGGCTTCATGATTTAAGATCTCGGTTTGGTATCATTCCCCAGGAGCCTGTCCTGTTTGAGGGAACCGTCAGAAGTAACATTGATCCAACGGGACAGTATACAGAGGAGGAGATATGGAAGGGCCTAGAACGGTGTCAACTAAAAGATGCAGTGGCTGCTAAGCCTGAGAAACTGGATTCTTTAGTGGTTGATAATGGAGAGAATTGGAGTGTGGGACAGAGGCAGTTGCTGTGTCTGGGGAGGGTTATGCTTAAGCGAAGCCGTCTCTTGTTCATGGATGAGGCAACGGCTTCTGTTGATTCCCAAACTGATGCTGTAATTCAGAAGATCATCAGAGAGGACTTTGCAGCATGTACCATTATCAGCATTGCTCACAGAATACCAACAGTCATGGACTGTGATAGGGTTCTAGTGATAGATGCAGGGCGGGCGAAGGAATTTGATAAACCCTCCAACTTGCTTCAGAGGCCATCGCTGTTTGGGGCATTAGTTCAAGAATACGCCAACCGCTCCTCTGGACTTTAA | 4530 | 0.4369 | MSSATWITSLSCSSPVKQTSGVTFLSTLPQWLRFVFLFPCPQRALLSAVDVVLLLVLFVFALKKLYSRFTANGGPTSELNKPLIRHNRAFVRTNLWFKLTLTATVVLAILYTVACILVFGRATQVPWKLVDGLFWLVQAVTHSVLAILIIHEKRFEAISHPISLRIFWVANFILISLFAASGVIRLVSVEETDDFSFKMDDIVSFISLPLSFFLLFVAIKGSSGIRSTQEAQPLMDEETKLYDPSLSKSNVTGFASASFVSKAFWLWINPLLSKGYKSPLKIDEVPFLSPEHRAERMSVLFESKWPKPRERSNHPVLTTLIRCFWKEAAFTAFLAVVRLCVMFVGPVLIQSFVDFTAGKRSSVYEGYYLVLILLIAKFIEVLATHHFNFNSQKLGMLIRCTLITSLYKKGLRLSCSARQDHGVGTIVNYMAVDAQQLSDMMLQLHAIWMMPFQVGIALFLLYKYLGASVLTALIGILGILVFVVFGTRRNNRFQFNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIMDFRQSEFEWLSKFMFSISGNIAVMWSTPLLISTLTFATAILLGVPLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDRYMISRELSDDSIEKEEGCGGRTAVEVKDGVFCWDDDSWEHDLKNINLEIKKGELTAIVGTVGSGKSSLLASVLGEMHKISGKVRVCGSTAYVAQTSWIQNGTIQENILFDLPMNRQKYYEVIRICCLEKDFEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMRDGMIVQSGKYNDLLDSGMDFGALVAAHETSMELVEQSAVMPGESSPKPSKSPKETSNHFRETNGESNSPDQPTAGKESSKLIKEEERETGKVSLHIYKLYCTEAFGWWGITGVLLLSLLWQASLMAGDYWLAYETSEERAHLFNPSLFISVYAIIAVVSVVLVVIRAFSFTILGLKTAQIFFTQILHCILHAPMAFFDTTPSGRILSRASTDQTNVDVFLPLFVGIVIAMYITVLGIFIITCQNSWPTVFLLIPLIWLNIWYRGYFLASSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKKEKFCEENVKRVNANLRMDFHNNGSNEWLGFRLELLGSLVFCFSALFMILLPSTIIKPENVGLSLSYGLSLNAVMFWAIYMSCFIENKMVSVERIKQFTKIPPEAAWNIKDRLPPPNWPAHGNVNIKDLQVRYRPNSPLVLKGITLSIRGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTEEEIWKGLERCQLKDAVAAKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSNLLQRPSLFGALVQEYANRSSGL | 1509 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi11g0515 | 1509 | CDD | ABC_6TM_ABCC_D2 | 950 | 1242 | IPR044726 | GO:0140359 | |
Glsi11g0515 | 1509 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 952 | 1230 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Glsi11g0515 | 1509 | SUPERFAMILY | ABC transporter transmembrane region | 317 | 621 | IPR036640 | GO:0005524|GO:0016020 | |
Glsi11g0515 | 1509 | Pfam | ABC transporter | 661 | 794 | IPR003439 | GO:0005524 | |
Glsi11g0515 | 1509 | FunFam | ABC transporter C family member 10 | 312 | 625 | - | - | |
Glsi11g0515 | 1509 | CDD | ABCC_MRP_domain2 | 1265 | 1485 | - | - | |
Glsi11g0515 | 1509 | MobiDBLite | consensus disorder prediction | 901 | 915 | - | - | |
Glsi11g0515 | 1509 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 641 | 863 | IPR027417 | - | |
Glsi11g0515 | 1509 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 643 | 866 | IPR003439 | GO:0005524 | |
Glsi11g0515 | 1509 | FunFam | ABC transporter C family member 3 | 1250 | 1501 | - | - | |
Glsi11g0515 | 1509 | Gene3D | - | 1250 | 1499 | IPR027417 | - | |
Glsi11g0515 | 1509 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 255 | 1503 | - | - | |
Glsi11g0515 | 1509 | MobiDBLite | consensus disorder prediction | 875 | 921 | - | - | |
Glsi11g0515 | 1509 | SUPERFAMILY | ABC transporter transmembrane region | 947 | 1247 | IPR036640 | GO:0005524|GO:0016020 | |
Glsi11g0515 | 1509 | CDD | ABCC_MRP_domain1 | 643 | 842 | - | - | |
Glsi11g0515 | 1509 | Pfam | ABC transporter transmembrane region | 332 | 596 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Glsi11g0515 | 1509 | Pfam | ABC transporter transmembrane region | 983 | 1194 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Glsi11g0515 | 1509 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1267 | 1501 | IPR003439 | GO:0005524 | |
Glsi11g0515 | 1509 | Gene3D | ABC transporter type 1, transmembrane domain | 913 | 1248 | IPR036640 | GO:0005524|GO:0016020 | |
Glsi11g0515 | 1509 | Gene3D | ABC transporter type 1, transmembrane domain | 302 | 621 | IPR036640 | GO:0005524|GO:0016020 | |
Glsi11g0515 | 1509 | FunFam | ABC transporter C family member 4 | 626 | 884 | - | - | |
Glsi11g0515 | 1509 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1259 | 1500 | IPR027417 | - | |
Glsi11g0515 | 1509 | ProSitePatterns | ABC transporters family signature. | 768 | 782 | IPR017871 | GO:0005524|GO:0016887 | |
Glsi11g0515 | 1509 | Gene3D | - | 622 | 881 | IPR027417 | - | |
Glsi11g0515 | 1509 | SMART | AAA_5 | 1293 | 1486 | IPR003593 | GO:0016887 | |
Glsi11g0515 | 1509 | SMART | AAA_5 | 670 | 851 | IPR003593 | GO:0016887 | |
Glsi11g0515 | 1509 | Pfam | ABC transporter | 1284 | 1432 | IPR003439 | GO:0005524 | |
Glsi11g0515 | 1509 | CDD | ABC_6TM_ABCC_D1 | 330 | 617 | IPR044746 | GO:0140359 | |
Glsi11g0515 | 1509 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 329 | 609 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Glsi11g0515 | 1509 | FunFam | ABC transporter C family member 5 | 913 | 1248 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi11g0515 | Glsi-ChrGlsi11 | 3357624 | 3363332 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi11g0515 | 640 | 859 | Calmodulin-binding Proteins | AT2G36910 | 30.932 | 1.24e-22 | 103 |