Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0505 ATGAAGGAATCTGCAGCGGAGTTTATGGAAGAAGTTTCACCTCCAGTTACGGTCCTTGGCAACATCGATGTCAGTTGTTTAAAGTCTGGTAACAGGGACTACGCAGCCCTAGGGATTAAATTTTCAACTGTGTTCACTATCCACCTCACCACCTTCAAAGCTAGAAGTTCATTCTGTTCTTGTACTACTAGTGCCCCCCTGTTCCAACTTCTTCATTATAACATGGTCAGAATAGTAAGCCTCCTGTTTCTGCTTGCGGTTTTGTTCCCTTCATCGCTGACAAATACAGGGCAATTGGTATGTGCAAAAGGGAACGATTATGTCAGAGATGCGTGCAGAGTGACTAGGTATCCAGAGCTATGTATCCAGTCGCTAGCACCATTTTCCAACACAGCCAGAAAAAGCCCAAGCAAGTGGGCTAGAGCCGGAGTGTCGGTGACAATAACTGAGGTTAAGAAAGTTCAAGCACATCTGGCAAAGTTGAAGAGATCCCGTTGTATGAGAGGAAGAAACAGAGCTGCCCTTTCAGATTGTATTGAGTCTTTTGCAGATGGCATTGACGAGCTTTACAGGTCCCTTGGTGTACTCAGAAGGCTAAGCAGAAGCACATTCGGTACCCAAATGGGGGACCTCAATACGTGGATAAGTGCAGCACTCACCGATGAAGATACTTGCCTCGACGGCTTCGAAGGCCAAAAGGGGACCCAAATTCGGTTGCTGCAAAATCGGGTTCTGAATGTCTCTTATATAACCAGTAACGCTCTAGCTCTTGTCAACGAACTTGCCACCACAGGTTTGGGTAGCATCACTGACCCATACAAGTTCTGA 828 0.4638 MKESAAEFMEEVSPPVTVLGNIDVSCLKSGNRDYAALGIKFSTVFTIHLTTFKARSSFCSCTTSAPLFQLLHYNMVRIVSLLFLLAVLFPSSLTNTGQLVCAKGNDYVRDACRVTRYPELCIQSLAPFSNTARKSPSKWARAGVSVTITEVKKVQAHLAKLKRSRCMRGRNRAALSDCIESFADGIDELYRSLGVLRRLSRSTFGTQMGDLNTWISAALTDEDTCLDGFEGQKGTQIRLLQNRVLNVSYITSNALALVNELATTGLGSITDPYKF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0505 275 CDD PMEI-like_3 111 263 - -
Glsi11g0505 275 Pfam Plant invertase/pectin methylesterase inhibitor 107 257 IPR006501 GO:0004857
Glsi11g0505 275 PANTHER PECTINESTERASE INHIBITOR-LIKE 80 257 - -
Glsi11g0505 275 FunFam Pectinesterase inhibitor 3 103 262 - -
Glsi11g0505 275 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 105 261 IPR035513 -
Glsi11g0505 275 SMART PMEI_2 103 257 IPR006501 GO:0004857
Glsi11g0505 275 NCBIfam pectinesterase inhibitor domain 78 261 IPR006501 GO:0004857
Glsi11g0505 275 Gene3D Invertase/pectin methylesterase inhibitor family protein 102 263 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0505 Glsi-ChrGlsi11 3296260 3297707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0505 108 275 Carbohydrate Esterase AT3G14310 32.370 4.02e-21 90.9