Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0502 ATGATATGGAATACCGGAAGAGGAATAAAAGATGCAACTGAAATAGACGCTGTTTCCGTTCCGTCGCCGATAATAGACTCTCTCCGGCCACGGAGGACCATGGGACGGCGTCAAAGTAGAAACTCTCGTGTTTGTCTCTGGTACCCTAGGCCCTACACAGACGCGAAAATGAGCCGCGGGGCAGCAACAGGAATGAAGGGGAAGAAGAAGGGAGCGAGCTTCGTGATCGACTGCGCGAAGCCTGTGGAAGATAAGATCATGGATATCGCTTCCCTGGAGAAATTCCTTCAGGAGAGGATTAAAGTGGGTGGCAAGGCCGGTGCCCTCGGTGATTCCGTCACTGTCACTCGTGATAAGAGCAAGATCACCGTCACTTCCGATAGCAATTTCTCTAAACGGTATCTGAAATACTTAACCAAGAAGTACTTGAAGAAGCACAATGTGAGGGATTGGCTTCGTGTGATTGCCTCCAACAAGGACCGAAATATTTACGAGTTAAGATACTTCAACATCGCTGAGAATGAGGGTGAGGAGGAAGACTGA 543 0.4899 MIWNTGRGIKDATEIDAVSVPSPIIDSLRPRRTMGRRQSRNSRVCLWYPRPYTDAKMSRGAATGMKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0502 180 Pfam Ribosomal L22e protein family 70 178 IPR002671 GO:0003735|GO:0005840|GO:0006412
Glsi11g0502 180 PANTHER 60S RIBOSOMAL PROTEIN L22 54 180 IPR002671 GO:0003735|GO:0005840|GO:0006412
Glsi11g0502 180 Gene3D - 61 180 IPR038526 -
Glsi11g0502 180 FunFam 60S ribosomal protein L22-2 61 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0502 Glsi-ChrGlsi11 3279173 3281206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0502 57 180 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.097 2.10e-66 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0502 11 3279173 3281206 Glsi11g0502 11 3279173 3281206 ECH