Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0493 ATGACTAAAATGACACTGGAGGATGTGGTGGGGGATGAAAGGATATTTTGGGTTTTTCGGCATTTATGGAAGCGAACCGACTTGACCCGATATGCAATTGCCGGAAAAACGCCAAATAAATCAATTTTAAGAACCCGAAACAAAACCCTAGCCTCCTCCTTTTGCTTCTATCAGCAAGCTGCTCGAAGTGGCAGTGTGACTGCACCAGCTCCATTCACCATGGGAATCGATTTGAAAGCAGGAGGTAAGAGCAAGAAGACCCGGCGGACCGCCCCCAAATCTGACGATATCTACCTCAAACTCCTTGTCAAGCTTTACCGGTTTCTAGTTCGGAGGACTGAGAGTAAGTTCAATTCTGTGATCCTGAAGCGGCTTTTCATGAGCAAAGTCAACAAGCCACCGATGTCTCTCTCTAGGTTGATCCATTTCATGAAGGGCAAAGAGGGTAAGATCGCCGTAGTTGTTGGGGCTGTGACTGATGATATTCGGGTTTATGAAGTCCCTGCACTGAAGGTGACTGCCCTGAGGTTCACAGAAACAGCCAGAGCTAGAATTGAGAAGGCTGGCGGAGAGTGCTTGACATTTGACCAACTGGCTCTTAGAGCTCCTCTAGGCCAGAACACGGTTCTTCTTAGAGGTCCAAAGAATGCCCGTGAGGCTGTCAAGCACTTCGGACCAGCTCCTGGTGTGCCACACAGTCACACCAAGCCTTATATCCGTTCAAAAGGAAGGAAATTTGAGCGGGCCAGAGGAAGAAGGAATAGTAGAGGTTTTAAAGTTTGA 783 0.4802 MTKMTLEDVVGDERIFWVFRHLWKRTDLTRYAIAGKTPNKSILRTRNKTLASSFCFYQQAARSGSVTAPAPFTMGIDLKAGGKSKKTRRTAPKSDDIYLKLLVKLYRFLVRRTESKFNSVILKRLFMSKVNKPPMSLSRLIHFMKGKEGKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYIRSKGRKFERARGRRNSRGFKV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0493 260 MobiDBLite consensus disorder prediction 237 260 - -
Glsi11g0493 260 SUPERFAMILY Ribosomal proteins L15p and L18e 93 212 IPR036227 -
Glsi11g0493 260 MobiDBLite consensus disorder prediction 224 260 - -
Glsi11g0493 260 PANTHER 60S RIBOSOMAL PROTEIN L18 74 260 IPR000039 GO:0003735|GO:0005840|GO:0006412
Glsi11g0493 260 Gene3D - 74 260 - -
Glsi11g0493 260 FunFam 60S ribosomal protein L18 74 260 - -
Glsi11g0493 260 Pfam Ribosomal protein 60S L18 and 50S L18e 75 260 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0493 Glsi-ChrGlsi11 3231248 3236665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0493 76 260 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.570 1.89e-105 301