Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi11g0477 | ATGTGTGGCGGTTCTATCATCGCTGACTTAATTCCTCACGGCCGTCGTCGCCGTCTTCCCGCCTACGACCTGTGGCCTGGCTCATTCGACAACCAGAATGACTTTCAGTTCGATTGTTCTCAACTGACCCAGGATCATTCGGTCCCCCTCCAAAGATCCCAACTTTCCTCAGTGGATGAGCAAGTTAAGAAGCCCGTGAAGAGGCAGAGGAAGAACCTTTACAGAGGGATTCGGCAGCGTCCATGGGGTAAATGGGCTGCTGAGATTCGCGATCCAAGGAAAGGGGTTCGTGTTTGGCTGGGTACCTTCAACACTGCCGAAGGAGCAGCTAGGGCCTATGACAGAGAGGCTCGCAAAATCCGCGGCAAGAAGGCCAAGGTGAACTTTCCCAACGAAGACGATGAGTACTCCACTCTAGCTCCTTCTGACCCGCCAAATCCACCCCAATGCTCCAAGTCTCCTCTGAATTTAGAGTTTGGTTTTGATCTGAATCAAGTTGGGGCAATTTCTTCCCATGATGGAGTTGTTGTTTTAGGCGATGAAAATTCGGGATGTGGGTCAGTGTCGGAAGGTGCTTGCTCAACAACGGATTTCATGGGCTCGAATCAGAACCTGAAGAGTTATTTTCCTCGGTGGAAAGTGAATGAGAAAGTGGGAGAGCAGGAAGAGAAAATGAACAGGGTGGTAATGGAAGGTCCGGAGGACGAGAACCAAATGGAGAAGATATCGGAGGAGGTGTCGTACGAGAACTACATGAAGTGTTATCAGATTCCACACCATAATGTGCAGTGGACAGCGCGGAATAACGTTCAAGAAAGCGTGATTGATGATCTGTGGAGCTTCGATGAGGGCATTCCTGCTTCTGTGACCTCTTCTGCCGAGGGAAAGACGTCCCCTTTCCTTCATGAATAG | 912 | 0.5022 | MCGGSIIADLIPHGRRRRLPAYDLWPGSFDNQNDFQFDCSQLTQDHSVPLQRSQLSSVDEQVKKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEGAARAYDREARKIRGKKAKVNFPNEDDEYSTLAPSDPPNPPQCSKSPLNLEFGFDLNQVGAISSHDGVVVLGDENSGCGSVSEGACSTTDFMGSNQNLKSYFPRWKVNEKVGEQEEKMNRVVMEGPEDENQMEKISEEVSYENYMKCYQIPHHNVQWTARNNVQESVIDDLWSFDEGIPASVTSSAEGKTSPFLHE | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi11g0477 | 303 | PRINTS | Ethylene responsive element binding protein signature | 74 | 85 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi11g0477 | 303 | PRINTS | Ethylene responsive element binding protein signature | 96 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi11g0477 | 303 | Pfam | AP2 domain | 74 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi11g0477 | 303 | ProSiteProfiles | AP2/ERF domain profile. | 73 | 130 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi11g0477 | 303 | MobiDBLite | consensus disorder prediction | 128 | 150 | - | - | |
Glsi11g0477 | 303 | FunFam | Ethylene-responsive transcription factor 2 | 72 | 131 | - | - | |
Glsi11g0477 | 303 | CDD | AP2 | 74 | 131 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi11g0477 | 303 | PANTHER | DNA-BINDING DOMAIN | 53 | 216 | IPR044808 | GO:0003700|GO:0009873 | |
Glsi11g0477 | 303 | SMART | rav1_2 | 73 | 136 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi11g0477 | 303 | SUPERFAMILY | DNA-binding domain | 73 | 131 | IPR016177 | GO:0003677 | |
Glsi11g0477 | 303 | Gene3D | AP2/ERF domain | 73 | 131 | IPR036955 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi11g0477 | Glsi-ChrGlsi11 | 3138862 | 3139856 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi11g0477 | 1 | 131 | AP2-EREBP Transcription Factor Family | AT3G16770 | 53.957 | 7.58e-39 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Glsi11g0477 | AP2 | 9.2e-12 | CL0081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi11g0477 | 11 | 3138862 | 3139856 | Glsi11g0477 | 11 | 3138862 | 3139856 | ECH |