Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0477 ATGTGTGGCGGTTCTATCATCGCTGACTTAATTCCTCACGGCCGTCGTCGCCGTCTTCCCGCCTACGACCTGTGGCCTGGCTCATTCGACAACCAGAATGACTTTCAGTTCGATTGTTCTCAACTGACCCAGGATCATTCGGTCCCCCTCCAAAGATCCCAACTTTCCTCAGTGGATGAGCAAGTTAAGAAGCCCGTGAAGAGGCAGAGGAAGAACCTTTACAGAGGGATTCGGCAGCGTCCATGGGGTAAATGGGCTGCTGAGATTCGCGATCCAAGGAAAGGGGTTCGTGTTTGGCTGGGTACCTTCAACACTGCCGAAGGAGCAGCTAGGGCCTATGACAGAGAGGCTCGCAAAATCCGCGGCAAGAAGGCCAAGGTGAACTTTCCCAACGAAGACGATGAGTACTCCACTCTAGCTCCTTCTGACCCGCCAAATCCACCCCAATGCTCCAAGTCTCCTCTGAATTTAGAGTTTGGTTTTGATCTGAATCAAGTTGGGGCAATTTCTTCCCATGATGGAGTTGTTGTTTTAGGCGATGAAAATTCGGGATGTGGGTCAGTGTCGGAAGGTGCTTGCTCAACAACGGATTTCATGGGCTCGAATCAGAACCTGAAGAGTTATTTTCCTCGGTGGAAAGTGAATGAGAAAGTGGGAGAGCAGGAAGAGAAAATGAACAGGGTGGTAATGGAAGGTCCGGAGGACGAGAACCAAATGGAGAAGATATCGGAGGAGGTGTCGTACGAGAACTACATGAAGTGTTATCAGATTCCACACCATAATGTGCAGTGGACAGCGCGGAATAACGTTCAAGAAAGCGTGATTGATGATCTGTGGAGCTTCGATGAGGGCATTCCTGCTTCTGTGACCTCTTCTGCCGAGGGAAAGACGTCCCCTTTCCTTCATGAATAG 912 0.5022 MCGGSIIADLIPHGRRRRLPAYDLWPGSFDNQNDFQFDCSQLTQDHSVPLQRSQLSSVDEQVKKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEGAARAYDREARKIRGKKAKVNFPNEDDEYSTLAPSDPPNPPQCSKSPLNLEFGFDLNQVGAISSHDGVVVLGDENSGCGSVSEGACSTTDFMGSNQNLKSYFPRWKVNEKVGEQEEKMNRVVMEGPEDENQMEKISEEVSYENYMKCYQIPHHNVQWTARNNVQESVIDDLWSFDEGIPASVTSSAEGKTSPFLHE 303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0477 303 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Glsi11g0477 303 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Glsi11g0477 303 Pfam AP2 domain 74 122 IPR001471 GO:0003700|GO:0006355
Glsi11g0477 303 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Glsi11g0477 303 MobiDBLite consensus disorder prediction 128 150 - -
Glsi11g0477 303 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Glsi11g0477 303 CDD AP2 74 131 IPR001471 GO:0003700|GO:0006355
Glsi11g0477 303 PANTHER DNA-BINDING DOMAIN 53 216 IPR044808 GO:0003700|GO:0009873
Glsi11g0477 303 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Glsi11g0477 303 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Glsi11g0477 303 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi11g0477 Glsi-ChrGlsi11 3138862 3139856 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0477 1 131 AP2-EREBP Transcription Factor Family AT3G16770 53.957 7.58e-39 135
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi11g0477 AP2 9.2e-12 CL0081
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0477 11 3138862 3139856 Glsi11g0477 11 3138862 3139856 ECH