Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi11g0476 | ATGGGCAGTTTTGGTTTGCACCGTTTGAAGCTGTACAAATCCAGGAGCGCTGCTGGTTTTTGCCTTCCCAAAGTTTGTTTTGCTTGGAAATTAACAGACCCGGCGGGACGCAATTCAGTGGGCGCTTACGGAATTGGGCAACTTCAACTTCAAGGACGCCGACCCATCTTTGTACCGTGGGGGGGGGGGGGTAATATATTCACATCCTACGCCACAGCATCGGCAGCTATCAGAGAGAGAGAGATGGTTTCGCTGAAACTCCAGAAGCGGCTTGCTGCTAGCGTGCTAAAGTGCGGCAGAGGCAAGGTTTGGTTGGATCCCAATGAATGCAATGAAATCTCCATGGCCAATTCTCGCCAAAACATAAGGAAGTTGGTCAAGGATGGCTTCATTATCAGGAAGCCAACCAAAATTCACTCTCGTTCACGTGCTCGTCGAATGAAGGATGCCAAGAGAAAAGGACGCCACTCTGGATATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCCACCAAAATCCTTTGGATGAGGAGGATGCGAGTGCTCAGACGCTTACTACGCAAGTACAGGGAATCAAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTAAAGGGAAACGTTTTTAAGAACAAAAGAGTTCTAATGGAGAGTATACACAAGTCGAAGGCTGAGAAGGCAAGAGAGAAGACCTTGTCTGACCAGTTTGAGGCCAAGCGTGCAAAGAACAAGGCAAGCAGGGAAAGGAAATTTGCCCGGAGAGAGGAACGCTTGGCCCATGGTCCTGGAGAAAAGCCATCAGCAGCACCATCCGCTCCTCCTACTACAGCATCCCAGCCAGCCCAAGCATCAAAGAAATCCAAGAAGTGA | 882 | 0.4932 | MGSFGLHRLKLYKSRSAAGFCLPKVCFAWKLTDPAGRNSVGAYGIGQLQLQGRRPIFVPWGGGGNIFTSYATASAAIREREMVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAHGPGEKPSAAPSAPPTTASQPAQASKKSKK | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi11g0476 | 293 | Gene3D | - | 83 | 137 | IPR015972 | GO:0003735|GO:0005840|GO:0006412 | |
Glsi11g0476 | 293 | MobiDBLite | consensus disorder prediction | 138 | 160 | - | - | |
Glsi11g0476 | 293 | Pfam | Ribosomal protein L19e | 85 | 226 | IPR000196 | GO:0003735|GO:0005840|GO:0006412 | |
Glsi11g0476 | 293 | FunFam | Ribosomal protein L19 | 138 | 272 | - | - | |
Glsi11g0476 | 293 | Hamap | 50S ribosomal protein L19e [rpl19e]. | 84 | 230 | IPR000196 | GO:0003735|GO:0005840|GO:0006412 | |
Glsi11g0476 | 293 | PANTHER | 60S RIBOSOMAL PROTEIN L19 | 82 | 269 | IPR039547 | GO:0003723|GO:0003735|GO:0022625 | |
Glsi11g0476 | 293 | MobiDBLite | consensus disorder prediction | 225 | 266 | - | - | |
Glsi11g0476 | 293 | MobiDBLite | consensus disorder prediction | 225 | 293 | - | - | |
Glsi11g0476 | 293 | MobiDBLite | consensus disorder prediction | 275 | 293 | - | - | |
Glsi11g0476 | 293 | FunFam | Ribosomal protein L19 | 82 | 137 | - | - | |
Glsi11g0476 | 293 | ProSitePatterns | Ribosomal protein L19e signature. | 88 | 107 | IPR023638 | - | |
Glsi11g0476 | 293 | CDD | Ribosomal_L19e_E | 85 | 248 | IPR033935 | GO:0003735|GO:0022625 | |
Glsi11g0476 | 293 | MobiDBLite | consensus disorder prediction | 138 | 166 | - | - | |
Glsi11g0476 | 293 | Gene3D | - | 138 | 268 | - | - | |
Glsi11g0476 | 293 | SMART | Ribosomal_L19e_2 | 84 | 227 | IPR000196 | GO:0003735|GO:0005840|GO:0006412 | |
Glsi11g0476 | 293 | SUPERFAMILY | Ribosomal protein L19 (L19e) | 84 | 225 | IPR035970 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi11g0476 | Glsi-ChrGlsi11 | 3134483 | 3137202 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi11g0476 | 82 | 293 | Cytoplasmic Ribosomal Protein Gene Family | AT3G16780 | 83.962 | 1.88e-125 | 355 |