Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0470 ATGTCCGGCGAGACTCATGCCCCTAATTCTAAGGTTATCCTTTGCAATGCTGGGGCTGGTGCAGCTGCCGGAGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTTCAGGTTCATGGGCTGCCGCAGCTCGCAAATGGAAGTATCAAAGGTAGTCTCATAGTTGGTAGTTTGGAGGAAATATTTCACAAGGAGGGGTTTCGAGGCATGTACCGTGGTCTGGCTCCCACTGTGCTGGCATTACTTCCAAACTGGGCGGTTTATTTTACTATTTATGAGCAGCTGAAGAGCCTTCTGTGCTCTGATGATGAACACCATCATCTTTCAATTGGAGCTAACATGATTGCTGCTTCTGGTGCTGGGGCTGCTACTACCATTGTGACAAATCCACTTTGGGTTGTCAAGACCAGACTCCAAACCCAGGGAATGAGACCGGGTGTCATGCCATATAGGAGCACGCTGTCTGCTCTGAGGAGAATTGCTCATGAGGAGGGCATTCGAGGGTTGTACAGTGGCCTTGTACCTGCTCTTGCCGGTATAAGTCATGTTGCCATCCAGTTTCCAACTTACGAGAAAATAAAATTTTATTTGGCAAACCGAGATAACACAGCAATGGATAAGCTTGGTGCACGCGATGTTGCAATTGCCTCGTCAGTTTCTAAAATTTTTGCATCCACGTTGACATATCCTCATGAGGTTGTACGGTCTAGATTGCAAGAACAAGGGCACCACTCGGAGAGGCGGTACACTGGTATGATTGACTGCATTAGAAAGGTATTTCAACAAGAGGGCCTACCTGGTTTTTACCGTGGGTGTGCCACCAACCTGCTGAGGACAACGCCAGCTGCTGTAATTACATTCACCAGCTTTGAAATGATACACCGGTTTCTAGTTTCACATTTCCCTTCTGATCCACGGCCTCATATATTGTGA 948 0.4694 MSGETHAPNSKVILCNAGAGAAAGVIAATFVCPLDVIKTRFQVHGLPQLANGSIKGSLIVGSLEEIFHKEGFRGMYRGLAPTVLALLPNWAVYFTIYEQLKSLLCSDDEHHHLSIGANMIAASGAGAATTIVTNPLWVVKTRLQTQGMRPGVMPYRSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKFYLANRDNTAMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSERRYTGMIDCIRKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSHFPSDPRPHIL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0470 315 Pfam Mitochondrial carrier protein 219 304 IPR018108 -
Glsi11g0470 315 Pfam Mitochondrial carrier protein 16 105 IPR018108 -
Glsi11g0470 315 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Glsi11g0470 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 301 IPR018108 -
Glsi11g0470 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Glsi11g0470 315 Gene3D Mitochondrial carrier domain 2 110 IPR023395 -
Glsi11g0470 315 FunFam Mitochondrial nicotinamide adenine dinucleotide transporter 1 109 305 - -
Glsi11g0470 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Glsi11g0470 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 14 304 IPR044712 GO:0006862|GO:0055085
Glsi11g0470 315 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 108 - -
Glsi11g0470 315 Gene3D Mitochondrial carrier domain 111 305 IPR023395 -
Glsi11g0470 315 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Glsi11g0470 315 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Glsi11g0470 315 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Glsi11g0470 315 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Glsi11g0470 315 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Glsi11g0470 315 SUPERFAMILY Mitochondrial carrier 15 297 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0470 Glsi-ChrGlsi11 3101226 3105125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0470 1 309 Chloroplast and Mitochondria Gene Families AT2G47490 78.317 7.64e-174 482