Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0459 ATGAACGTGGGAAATGGAAATGCCGTAACGGGTTATCGACGGTGGATGAGCCACGACTGTAGCATTGAGACATTGTCAACGTGGCGCAAGTTGCCACCACAGCTAGCCACAAAACCAAACCACTGGTGCATTCCAGTTCTAGTAGATATGGGAAGAGCACCTTGTTGTGAGAAAGTGGGGTTGAAGAAGGGGAAGTGGACAGCAGAAGAGGATGAAATCTTGACCAACTACATTCGGGCCAAGGGGGAAGGATCCTGGAGGTCACTGCCCAAGAATGCAGGATTGCTAAGGTGTGGGAAGAGTTGCAGATTAAGATGGATTAACTATTTGAGAGCTGACCTCAAACGAGGAAACATTTCTGTTGAAGAGGAAGAGATCATCATAAAACTGCAAGCTTCTCTGGGCAACAGCTTCCGGAGGCCAGCCAGTAGGGAGACTATGCCAGCGATCATGATGGAAGCAACCAAGCGAAAAGGTGGTAGAACCAGCCGTTGGGCCATGAAGAAGAACAAAAGCAACACCCAAGAGGTTACGGAGAGACCCGAACAAATATTTATTGATCACAACATTGAAGCAGTTCCGCTGCCAACCACACCAGAACTAGAGGGCGAGAGCTTGTCTATAGCTAGTCCCTCCTTAGAGGATTTCTTGGTTTTTCCAGACACAGAGAACAAGGTAGATTGTCACGAGGGAAGTCATGAGAGTGAGATTTTAGAAGGCATTGATGGTGGTGGGGTGTTATGTTTTAATGACGTGGTGGACACTTGCCTGCTGGAAGCGGAAGCAGGTGGGGTTTTGACTTTGAGCTCTAGTGAAGAGAGAGAAAGAAATGATGCGGTACGTGTAGACAGTGAGGAATGTGTAAGCGAGGTGACGTGTCCAAACAAAATGGCTACAGGCGAGGACATTCCAGAGAGTACCGCTGGAGAGAGTTATTCTTGCTCTTCCATGGCTTCGAATTCGGTTTTCAATGATAACTGGGACTGGGAGAGTGTCTTTAACGTTAGCGTTCAATTGAATGATCATAATACTGAGTCTGAGTCATTGGAGGACAAAGAAAACCTGCTGTCTTGGCTGTGGGAAGACGATGATTGGGAAAGCGACTGTGAGATTAAGGGAGAGATGGATCCTGACAAACAAAATGCTATCGTTGCTTGGTTCCTTTCTTGA 1170 0.4718 MNVGNGNAVTGYRRWMSHDCSIETLSTWRKLPPQLATKPNHWCIPVLVDMGRAPCCEKVGLKKGKWTAEEDEILTNYIRAKGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISVEEEEIIIKLQASLGNSFRRPASRETMPAIMMEATKRKGGRTSRWAMKKNKSNTQEVTERPEQIFIDHNIEAVPLPTTPELEGESLSIASPSLEDFLVFPDTENKVDCHEGSHESEILEGIDGGGVLCFNDVVDTCLLEAEAGGVLTLSSSEERERNDAVRVDSEECVSEVTCPNKMATGEDIPESTAGESYSCSSMASNSVFNDNWDWESVFNVSVQLNDHNTESESLEDKENLLSWLWEDDDWESDCEIKGEMDPDKQNAIVAWFLS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0459 389 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 50 138 - -
Glsi11g0459 389 SMART sant 62 112 IPR001005 -
Glsi11g0459 389 FunFam Myb transcription factor 60 116 - -
Glsi11g0459 389 SUPERFAMILY Homeodomain-like 64 137 IPR009057 -
Glsi11g0459 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 114 IPR017930 -
Glsi11g0459 389 Gene3D - 60 116 - -
Glsi11g0459 389 CDD SANT 65 110 IPR001005 -
Glsi11g0459 389 ProSiteProfiles Myb-like domain profile. 58 110 IPR001005 -
Glsi11g0459 389 Pfam Myb-like DNA-binding domain 63 110 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0459 Glsi-ChrGlsi11 3020811 3023109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0459 50 389 MYB Transcription Factor Family AT2G47460 35.825 2.96e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi11g0459 Myb_DNA-binding 3.9e-12 CL0123