Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0444 ATGGGGGCAGATGAAGTACCACTAGACGATAAAGCAAGAAGAATGAGAGATCTACTGTCCAGTTTCTACTCACCAGACCCTTCATTGTCGTCCAACTCCAGCAACATCTCCAAATTCGCCACCCTTGATGATATCAACTCCAATTCCTTCAATCCTGATCAGTACATGAATCTCCTGGTACAAAAGTCAAATTTGGAAGGACTTCTCCAGAGGCACGTTGAAATGGCAGCTGAAATAAAAAATCTTGATACTGATTTGCAAATGTTAGTCTACGAGAATTATAACAAGTTCATCAGCGCTACGGATACCATCAAGAGGATGAAAAGTAACATTTCAGGGATGGAGGCAAATATGGAACATCTTCTTGAGAAGATAATGTCTGTGCAGTCAAGAAGTGACAGTGTTAACACTTCTCTATTTGAAAAGAGGGAGCATATAGAGAAACTAAATAGGACGTGCAATCTTCTTCGTAAAGTTCAGTTCATATATGATCTACCAGACAGACTTGGAAAGTGCATTAAATCAGAGGCCTACACAGATGCAGTCAGGTTTTACACTGGAGCGATGCCAATTTTTAAGGCATATGGAGACTCATCATTCAAGGATTGTAGGAGAGCCTCTGAAGAAGCAATAGCTATCATAATAAAAAACTTACAGGGGAAGCTATTTTCAGATTCTGAATCAATGCAAGCAAGAGCTGGGGCTGCAGTGCTCCTAAAGCAGTTGGATTTTCCGGTGGAGGACTTGAAGGCTAAGCTACTTGATAAGTTGGAACAATCTATTGCAGACATTAAGCTGAACCCTAAAGAAACAAACAATGCTTCTGTGGATCCTCCTTTTTCCTCTGCTCATGAGGCAGCCATTTGTGAGTTTGTGGAGGCAGTTCGTGCTTTTCGAGTAATATTTCCTGATTCAGAAAAGCAATTAGTTAAACTTGCTCAAGACCTGATTACCAAGCACTTCATAATTACTGAGGAATATGCAAAGAAACGGATTTGTGCAGCAGATCTACTTGGGGTTCTTCGAGTCATCTGGAACGATGTGCTTCTGATGGATGAAGTCTTACAGGAAGCAGCTCTCTCTAACCATTCTCTTGAGGCTGCCAAGGTTGCTATCAAGTTGTATATTAGCAGCTTATTTTCTCATCTTCTGCAAGATGTCTCAGATTCCCTCTTGAAGGTTCTGAAAAAGGATGGAGTAGAGGAATACTCCCTGGAAAATGCTTTTGATTCTAGCACAAAAGCAGTTCTCCAAGGCAGCAGGAATGTCTTACTTGACTTCCGCAAAATTCTAGATGACAACTCTGGCCTCTTAGTAAGATTAAGGGAGTTAATCATTGATTGGGTTAAAGAAGGGTTTCAAGACTTTTTTAGGCAACTTGAGGATCAGTTCCAGTTATTTTCAGGAATCAATAATTCTTCAGGCATTCAAGATCATAGTTTGACTCTGGGAACTCAAGCTGACAAAGCTTTTGCTGGCCTTGTCCTAGTGCTGGCACAACTTTCTGCTTTTATTGAACAAACTGCCATTGTGAAAATTGCTGAGGCAAGAATTCAACTGATGGGCTTAGAGATAGCCATTTCCTTTTCTGGTGGTAGTGTTGGAAGCTATGAATATGGAACTGCCTTTGTTCCTGGAGAAATCTGTCGGAAATTTCGGTCAGCTGGTGAAAAATTCCTGCACCTGTACATAAATATGAGAACTCAGAGAATTTCACTTCTCCTGAAGAAGAGGTTTACCACGCCTAATTGGGTAAAGCACAAAGAGCCAAGAGAGGTTCATATGTTCGTTGATTTATTTCTTCAAGAGGCAGAAGTTATTGTCAAGGAAGTGAAGCAGATTTTGCCTCAAGGGATACGCAAGCACCGCAGGACTGATAGTAATGGAAGTAGTACCTCATCAAGGAGCAACCCCTTACGAGAGGATAAATTGGGTCGGTCAAATACTCAGAGGGCAAGGAGCCAGCTTTTGGAAACACATCTAGCAAAACTATTTAAGCAAAAAGTTGAAATTTTCTCAAAAGTAGAATATACACAGGAGTCAGTTGTTACTACCATAGTTAAATTGTGCCTAAAAAGTTTGCAAGAATTTGTTCGACTTCAGACTTTTAACCGGAGTGGATTTCAGCAAATTCAGTTGGATATTCAGTTCCTAAGGACTCCAATAAGGGAAATGGTTGAAGATGAAGCTGCTATGGACTTCTTTCTTGATGAGGTGATTGTTGCTGCTGCAGAGCGGTGTCTTGACCCAGTACCTTTGGAGCCTCCCATTTTGGACAAACTTATACAAGCAAAATTGCCGCCCATTGAATCCTTTGTTGTGCTTTGCTCTGCCATGCTGGATGTGACTGTGGCTCGTCTCAAAAGGGAACTAGGTTCACCCTGGATGATCCCCTTGCGAGGCTTCGTTAAGCTCAACGTAGATGAGATATGTTTGGGAGTTTCTTTGAGTAATCGGGGTATTACTACAAATGTGCACGCCGAGCTTCATGCAGATCTGTCAAGGTTTGAAACTTGCTTGAGCATAGGGTTTTCGGTGTTTCCTAGATTCACAGTTCTGGCGAAGGAGTCCCTTTCGAACTTCGCAGATGCAAATGGTGAAGCCAAATACACCAGCATTCTGTGCAAAGATTTAGACGAAGAATTTCTCAGGTGTGTTCCTGAAAATTCTCGGAGGTATATAGGAATTTTCGCTGATGCCATCGATGAGCTCATGCCGGAGCCCACGGAGGCTTTTACGGACGATGATCATGACATATTGATGACACAGAGATCTGACGAAGGAGTAGAAGTTGCCGATGGTTCAGACCCAGTTCAGAAGATGCCTTCTAAGATCGAGCGCTACTTGTGGCTGTGTACACATGTGAAGATTGCGGTTTTGAAATTTACCAGGATTGGTCTTGTTTTTGGGGCATGTTTGGATTGTCGGGAATTAGAGTGCCTGTGGGTCCTTGACATTGTTGCAAAAATTCAAGAATTAGCTGAACATGTTCCAAAAGGCCATATTCCGCGAACAATGACTTTTCATTTTAGGGGAGAGCTCACAAGAAAGATATATGAATTTAGAGGAGATGACGAAGAGCAGATAGCCCGTTTAGCAGAAGATGGCGATATCTACAATAGTTTGGCACGATCACTGGCTCCTGAAATTTTTGGACATGAAGATATAAAAAAGGCGCTGCTACTTCTTGTTGGTGCTCTCCATCGGAAGTTGAAAGATGGGATGAAGCAAAGAGTTAGCTCCTTAAACACAATCAATGTAGCACCCAGGGGGATGTACACCACTGGTAGAGGAAGTAGTGGAGTTGGTCTAAGTGCTGCTGTTCAGAAAGACCCAGTGACAAAGGAGATGGTTCTGGAAGGTGAAGCCTTGGTTCTAGCAGATATGGGCATATGCGCCACTGATGAGTTTGGCAAGATGGATGAATCAGATCGTACTGCTCTACATGAAGCTATGTAG 3459 0.4232 MGADEVPLDDKARRMRDLLSSFYSPDPSLSSNSSNISKFATLDDINSNSFNPDQYMNLLVQKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMEANMEHLLEKIMSVQSRSDSVNTSLFEKREHIEKLNRTCNLLRKVQFIYDLPDRLGKCIKSEAYTDAVRFYTGAMPIFKAYGDSSFKDCRRASEEAIAIIIKNLQGKLFSDSESMQARAGAAVLLKQLDFPVEDLKAKLLDKLEQSIADIKLNPKETNNASVDPPFSSAHEAAICEFVEAVRAFRVIFPDSEKQLVKLAQDLITKHFIITEEYAKKRICAADLLGVLRVIWNDVLLMDEVLQEAALSNHSLEAAKVAIKLYISSLFSHLLQDVSDSLLKVLKKDGVEEYSLENAFDSSTKAVLQGSRNVLLDFRKILDDNSGLLVRLRELIIDWVKEGFQDFFRQLEDQFQLFSGINNSSGIQDHSLTLGTQADKAFAGLVLVLAQLSAFIEQTAIVKIAEARIQLMGLEIAISFSGGSVGSYEYGTAFVPGEICRKFRSAGEKFLHLYINMRTQRISLLLKKRFTTPNWVKHKEPREVHMFVDLFLQEAEVIVKEVKQILPQGIRKHRRTDSNGSSTSSRSNPLREDKLGRSNTQRARSQLLETHLAKLFKQKVEIFSKVEYTQESVVTTIVKLCLKSLQEFVRLQTFNRSGFQQIQLDIQFLRTPIREMVEDEAAMDFFLDEVIVAAAERCLDPVPLEPPILDKLIQAKLPPIESFVVLCSAMLDVTVARLKRELGSPWMIPLRGFVKLNVDEICLGVSLSNRGITTNVHAELHADLSRFETCLSIGFSVFPRFTVLAKESLSNFADANGEAKYTSILCKDLDEEFLRCVPENSRRYIGIFADAIDELMPEPTEAFTDDDHDILMTQRSDEGVEVADGSDPVQKMPSKIERYLWLCTHVKIAVLKFTRIGLVFGACLDCRELECLWVLDIVAKIQELAEHVPKGHIPRTMTFHFRGELTRKIYEFRGDDEEQIARLAEDGDIYNSLARSLAPEIFGHEDIKKALLLLVGALHRKLKDGMKQRVSSLNTINVAPRGMYTTGRGSSGVGLSAAVQKDPVTKEMVLEGEALVLADMGICATDEFGKMDESDRTALHEAM 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0444 1152 SMART mcm 937 1152 IPR031327 GO:0003677|GO:0005524|GO:0032508
Glsi11g0444 1152 MobiDBLite consensus disorder prediction 619 648 - -
Glsi11g0444 1152 PANTHER UNCHARACTERIZED 7 766 IPR014812 -
Glsi11g0444 1152 Pfam MCM P-loop domain 1025 1152 IPR001208 GO:0003677|GO:0005524|GO:0032508
Glsi11g0444 1152 Coils Coil 104 131 - -
Glsi11g0444 1152 Pfam Vps51/Vps67 45 130 - -
Glsi11g0444 1152 ProSiteProfiles MCM family domain profile. 1038 1152 IPR001208 GO:0003677|GO:0005524|GO:0032508
Glsi11g0444 1152 Gene3D - 1018 1152 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0444 Glsi-ChrGlsi11 2906362 2920440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0444 853 1152 Core DNA Replication Machinery Family AT4G02060 46.637 3.50e-97 323