Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0443 ATGGCTTCGATTCCACATGTGGCTAGTTCGGGATCGGAAGGCGGAGACCCACGATATGATATGATCGATGAGAGGAAGAGGAAGAGGATGATGTCCAACCGCGAATCGGCAAGGCGATCCCGGATGAAGAAGCAGAAGCAAATGGAAGATCTAACCAACGAAGTCAGCCGATTGGAAGCTGAAAATAATCAACTAGTTCAGAACATAAAGGCCAAGGAGGAAGCATACATCGAGGTCGAATCCGTTAACAGTATCTTGAAGGCTCAGTTATTGGAATTGACTGATCGATTGAGGTTTCTGAACTCGATCCTTGAGATCGCTGAAGAGGTCAGCGGGTTTTCCGTTGAAATCCCTGAGATACCAGATCCTCTCCTGGAACCATGGCAGCTTCCTCTTCCAATGCAGCCGATCATGGCGTCCGCAGACATGTTTCTGCATTGA 441 0.483 MASIPHVASSGSEGGDPRYDMIDERKRKRMMSNRESARRSRMKKQKQMEDLTNEVSRLEAENNQLVQNIKAKEEAYIEVESVNSILKAQLLELTDRLRFLNSILEIAEEVSGFSVEIPEIPDPLLEPWQLPLPMQPIMASADMFLH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0443 146 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Glsi11g0443 146 PANTHER BZIP TRANSCRIPTION FACTOR 44 10 142 - -
Glsi11g0443 146 Pfam bZIP transcription factor 25 76 IPR004827 GO:0003700|GO:0006355
Glsi11g0443 146 Gene3D - 23 78 - -
Glsi11g0443 146 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Glsi11g0443 146 FunFam BZIP transcription factor 23 74 - -
Glsi11g0443 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 70 IPR004827 GO:0003700|GO:0006355
Glsi11g0443 146 Coils Coil 34 75 - -
Glsi11g0443 146 SUPERFAMILY Leucine zipper domain 25 78 IPR046347 GO:0003700|GO:0006355
Glsi11g0443 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Glsi11g0443 146 MobiDBLite consensus disorder prediction 17 51 - -
Glsi11g0443 146 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0443 Glsi-ChrGlsi11 2904107 2904547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0443 6 144 bZIP Transcription Factor Family AT3G62420 57.143 4.75e-54 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi11g0443 bZIP_1 8e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3430 02 81650695 81651135 Glsi11g0443 11 2904107 2904547 CCT