Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0436 ATGGTGTCGAAAGCTACAGACTCTGCTACCAAACTTAGAAAATTACATGGAGAGCCAGCAAACGTTGCTGTTGGAACCTTGTCAATCAAGATTAATCAGCTGAAAAAGCAAATCCAGGCGGATAGAATTGTATCAATTAAAGAAAAACTTCAGAGGAATGGGAAGAAGCTAGAATATCATATTTCACAGGTCATCTTAGCGATGTCAAGAAGGGAATCTTCATATACAGAGGAAGATAGGACCAGTCAAATGCTTTCGTCAAGAATTGACCATCCTATATGTAAGTTCAGTGGTTTCTCTCAAGGTTCAGGAGACAAAGACCAAACCAACAATCAAGAAGTATTATGTGCAACAAGTATCAAGATTCCATATATTGAAAAATTACCACCATATACATCTTGGATATTTTTGGACAGAAATCAAAGAATGGCTGAAGATCAGTCGGTGGTTGGGAGAAGGCGTATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAACTAACAGAACCTGATGAAGATAAACATGAATTTTCTGAGGGTGAAGATCAAATTTTATTGATGGCATTTGAGGAACATGGGTTGACTAAGGAAGTATTGGATATTGTGAGCCAGTTTGTTGGAGGTACTATACTGGAAATCCAGGAAAGGTACAAAAATCTCAAGGAAAAGAATATGGGGAGGCAGGACCAGCATTCTGAAGTTTCTGGAGATTATGAATCTCATATTGGCATATGTTTGGAGAAAAGCCTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGCCGGTGCATGATGTTTGACTGTCGTCTGCATGGCTGTTCTCAATCCCTAATATATCCTAGAGAAAAGCAGCCAGTTTGGCTTGAACATGAAGAGGAGAGGAAACCATGCAGTGACCAGTGTTACCTTCGGTTAAAGCCTGTGAAAATTTTGCCAGACCCTAGGTGTTTACAGGGAAAGAAAACTGCAACTACGGAAGAGGGAGAATTGACATTGGCACCCTCCAACGCAGAAGAGCCACAAAACCAGAGCAGTGCAATTATCTTGCTGGAAGAAAGATGGAATTCTGTGAAAATGACACCTCTTCCAATAGAAGTTGGTAGTAGTAGAGCCCTCAACCTAAATGTACCTGTCTCAGAAAGTCTGGGGAAACGGAAGTTCACAAATCAGTCAGATACAGCACTGTGTGACTTTACATTACTTCCTGACGATTCAAATAGTTCTTGTAAAAAGCAAAAGAAAATCTCAGATACTGATATAGTTCCTGCAATTAATGATCATAACAGGGACCTTAATGTGGGTGCATGTGATGAAAACGAACGCATTATTACTTGTGCATCTTTAAATGATTCTGTAGGGCATACTTCAAATAAATTAATAATTTCTGGGAGCACTTGTCATGGGGAACATGACAATGTTGGGAATGGACCAAAAGATGTCACGGCTGAGGCAGAATTCAAGCAATCCTCCAATTCAAGGGAAGAGCATGTTGAAGGGTTGCAAAGTCTCTCAGAATGGAAACCTCTGGAGAAGGAATTATACTTGAAGGGAATAGAAATGTTTGGGAGAAGCAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCTTGAAGACTTGCATGGAAATAGCTAGTTACATGCATGCTGGTGGAGCGTCAATGCCCCACAGTTCTATTGTTGCACCAAGTTCACTCAGGGATGACAATGGAAAAACTGATGCAGAGTGCACAGACCAAGAGATGCCAGCGAGGGCACGGTTGCTGCGTAAAAGGGGCAAGACAAGGAAATTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGTAAGCAATATACACCATGTGGATGTCAGTCAATGTGTGGAAAGCAATGTCCATGTCTTCATAATGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAAAGCTGCAAAAATCGATTCAGGGGATGTCACTGTGCTAAGAGTCAATGCAGAAGTCGACAATGTCCATGTTTTGCTGCTGGACGTGAATGTGACCCAGATGTTTGTCGAAATTGCTGGGTTAGTTGCGGTGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGATAGTCAGTGCGGAAATATGAGGCTCCTTTTAAGGCAACAACAGAGGATTCTTTTGGCGAAGTCTGATGTCGCAGGATGGGGAGCTTTCTTAAAGAACTCAGTTAACAAAAATGATTACCTAGGAGAATACACAGGGGAACTGATCTCCCACCGAGAAGCAGATAAGCGTGGGAAAATATATGATCGTGCAAACTCATCATTCCTTTTTGACTTGAATGATCAGTATGTTCTGGATGCTTATCGCAAAGGAGACAAGCTAAAATTTGCTAACCACTCATCAAGTCCGAACTGCTATGCAAAGGTGATGCTGGTTGCTGGGGATAATCGAGTAGGAATCTTTGCCAAGGAACACATTGAAGCTAGTGAGGAGCTCTTCTATGATTATCGTTATGGTCCCGATCAAGCACCCATTTGGGCTCGTAAGCCTGAGTCTTCCAAGAGAGATGAATTAGCAGTTTCTCAAGGCAGAGCGAAGAAACACCAGTCTCATTGA 2643 0.4162 MVSKATDSATKLRKLHGEPANVAVGTLSIKINQLKKQIQADRIVSIKEKLQRNGKKLEYHISQVILAMSRRESSYTEEDRTSQMLSSRIDHPICKFSGFSQGSGDKDQTNNQEVLCATSIKIPYIEKLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPDEDKHEFSEGEDQILLMAFEEHGLTKEVLDIVSQFVGGTILEIQERYKNLKEKNMGRQDQHSEVSGDYESHIGICLEKSLSTALDSFDNLFCRRCMMFDCRLHGCSQSLIYPREKQPVWLEHEEERKPCSDQCYLRLKPVKILPDPRCLQGKKTATTEEGELTLAPSNAEEPQNQSSAIILLEERWNSVKMTPLPIEVGSSRALNLNVPVSESLGKRKFTNQSDTALCDFTLLPDDSNSSCKKQKKISDTDIVPAINDHNRDLNVGACDENERIITCASLNDSVGHTSNKLIISGSTCHGEHDNVGNGPKDVTAEAEFKQSSNSREEHVEGLQSLSEWKPLEKELYLKGIEMFGRSSCLIARNLLSGLKTCMEIASYMHAGGASMPHSSIVAPSSLRDDNGKTDAECTDQEMPARARLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDSQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSSPNCYAKVMLVAGDNRVGIFAKEHIEASEELFYDYRYGPDQAPIWARKPESSKRDELAVSQGRAKKHQSH 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0436 880 SUPERFAMILY SET domain 602 851 IPR046341 -
Glsi11g0436 880 ProSiteProfiles CXC domain profile. 618 717 IPR026489 -
Glsi11g0436 880 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 26 879 IPR045318 GO:0006338|GO:0042054
Glsi11g0436 880 Pfam SET domain 742 845 IPR001214 GO:0005515
Glsi11g0436 880 CDD SET_EZH 731 847 - -
Glsi11g0436 880 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 880 IPR025778 GO:0031519
Glsi11g0436 880 MobiDBLite consensus disorder prediction 857 873 - -
Glsi11g0436 880 MobiDBLite consensus disorder prediction 853 880 - -
Glsi11g0436 880 ProSiteProfiles SET domain profile. 731 846 IPR001214 GO:0005515
Glsi11g0436 880 SMART sant 180 230 IPR001005 -
Glsi11g0436 880 SMART sant 511 561 IPR001005 -
Glsi11g0436 880 Gene3D SET domain 632 848 IPR046341 -
Glsi11g0436 880 Pfam CXC domain 670 701 IPR041355 -
Glsi11g0436 880 SMART set_7 731 852 IPR001214 GO:0005515
Glsi11g0436 880 SMART CXC_2 666 703 IPR033467 -
Glsi11g0436 880 FunFam Putative histone-lysine N-methyltransferase EZH2 632 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0436 Glsi-ChrGlsi11 2873838 2882135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0436 720 849 C2H2 Transcription Factor Family AT2G23740 27.211 1.01e-09 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi11g0436 SET 1.4e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0436 11 2873838 2882135 Glsi11g0436 11 2873838 2882135 ECH