Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0435 ATGGAGAATGACTTTTTTTCTTTCACAGCTTTCAATTTCAACGAAATCCAGGGCGGTTATGGTTCAACAAAAGAGGAGGTTGGGTTCCCAGGGAAAAGCAGTTTCCCTGACATGGAATTTCTGGGAGAGATTACTTCTCTGTCTTCTGAGAATGAGATAGGAGCCCGTCTGTTTACAGACCCAAATCAACTTCAGCAACAAGAACCCAAATTTGATAACTTGATGTCGGAAGATTGTGGCTTTGACCCTGTTCTGCAAGCAACACAACCATTTCAGGAAACTTCATGGTTAGAGAATCAGGGAGTGGCAAGTTCAGAACCATCATCTTCATTTTTAGCATCCTTGGAGCTCTTGAGCAATTACGGAAGTAAATTCAACAGGCTAAGGGGGCAAATTATTGGCAACTCAATCGATGTTGAAACTTTTAGGGGTCGCCAGAAGTTGTCGACTGAAGAAATAATAAGAGTGGCCGGAGAAAGGTATGTCCAATTCTCTTCCCATTGGTACGATAATATCTGCATACCAATGCATCCATATGGATTTGGTGTCGTGGGTGGTCTGTCTGAGGAAGAAAACAAAGACGTTGAACTTGCGCAGGTTCTTCTGACTGCAGCTGAGAGGGTAGGCTGCGAACAATTCGAAAGTGCAAGCAGATTACTTTTACACTGTCAATGGAATTCATCTGCTGGTGCCAGCCCAGTTCAGAAAGTTATCTTTCATTTCGCTCGAGCACTTGGAGAGAGAATCAAGAAAGAAACAGGAATGGTAAAACTCAAGGGATCTGAGATAAACGAAGAACATGAATTGATTCACAAGTTGGATTTCAACGTATCTATTACATGCCATAAAAATATTCCTTTTAATCAAGTAATGCAATTAACTGGTATACAAGCTATAGTGGAGCATGTTGCATCAGAGACCAAAATCCATCTGATTGATCTTGAAATCAGACGTGGGGTGCAGTGGACAGCTTTGATGCAAGCACTGGCCGAGCGCCATGAAAGAAAAGTAGAGCTTCTGAAGATAACTGCAATTGGATTTACAGGCAAAACCAAGTTACTAGAGACAAGGAAAAATTTAGCGAGTTTTGCGGAGTCCCTGAACTTGCCCTTTTCATATAAGGCAGTTTTTGTTACAGACATGACGGAAATAAAGGAAGATCAATTTGAGATTAAAGATGACGAAGCCGTAGTTGTCTACTCTCCCTATGTACTGAGAACGATGGTATCAAGGCCTGACTGCTTGGAAAACTTGATGCGGGTAATAAGAACTATGAAACCATGTATAATGGTAGTGCTTGAAGTGGAAGCAAACCATAATTCACCCTCCTTTTTGAATCGCCTCATTGAAGCATTGTTCTTCTTCTCGGCATATTTCGATTGCATTGAAACATGCATGAAAGAGGAGAATGAAAGCAGAAAGATTATTGAGGGAATATTATGTGAAGGGATACTAAACATTGTTGCTATGGAAGGCAGGGAAAGGACAGTGAGGAATGTGAAGATTGATGTTTGGAGAAGGTTCTTTGCAAGGTTCAGAATGGAGGAGACCGGCTTTAGTGAATCATCTCTGTACCAAGCTAACTTGGTGGTCAAACAATTTGCCTATGGGAACTTTTGCACTCTAGATAAAAATGACAAGTGTCTAATAGTTGGGTGGAAGGGGACCCCAATCAATTCCCTTTCAGCATGGAGGTTCCCTTGA 1704 0.4155 MENDFFSFTAFNFNEIQGGYGSTKEEVGFPGKSSFPDMEFLGEITSLSSENEIGARLFTDPNQLQQQEPKFDNLMSEDCGFDPVLQATQPFQETSWLENQGVASSEPSSSFLASLELLSNYGSKFNRLRGQIIGNSIDVETFRGRQKLSTEEIIRVAGERYVQFSSHWYDNICIPMHPYGFGVVGGLSEEENKDVELAQVLLTAAERVGCEQFESASRLLLHCQWNSSAGASPVQKVIFHFARALGERIKKETGMVKLKGSEINEEHELIHKLDFNVSITCHKNIPFNQVMQLTGIQAIVEHVASETKIHLIDLEIRRGVQWTALMQALAERHERKVELLKITAIGFTGKTKLLETRKNLASFAESLNLPFSYKAVFVTDMTEIKEDQFEIKDDEAVVVYSPYVLRTMVSRPDCLENLMRVIRTMKPCIMVVLEVEANHNSPSFLNRLIEALFFFSAYFDCIETCMKEENESRKIIEGILCEGILNIVAMEGRERTVRNVKIDVWRRFFARFRMEETGFSESSLYQANLVVKQFAYGNFCTLDKNDKCLIVGWKGTPINSLSAWRFP 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0435 567 ProSiteProfiles GRAS family profile. 188 565 IPR005202 -
Glsi11g0435 567 Pfam GRAS domain family 198 565 IPR005202 -
Glsi11g0435 567 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 129 554 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0435 Glsi-ChrGlsi11 2869186 2870889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0435 187 566 GRAS Transcription Factor Family AT3G03450 29.820 5.38e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi11g0435 GRAS 5.4e-81 CL0063