Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0433 ATGAAAAAGAGGGGATACTCGGCCATGGATGATACTGCCTCCCCAAAACTTGAGTCAGTAGCATCTTCAGAGCTCAAACCACAAAATCAATATTTCAAAAAAAGGAAAATGGTTCAGAAAACAGTTGTGGCAGTGAGAATAAGAGAAAATGTTAGCAAAGTGAAGAATGAAGGGCTACCTTCAGACTTCTGGTCTTGGAGGAAATATGGTCAAAAGCCTATTAAAGGATCTCCATATCCAAGGGGCTATTACCGGTGCAGCACATCGAAGGGTTGTCCAGCCAAAAAGCAGGTAGAGAGATGCAGAACAGATGCTTCAATGCTTATTGTCACATATACCTCTACCCATAACCATCCAGCTCCTGATCTCCCCTCCGTCACCAATTTGGCCCCACAATCCAAAGAATCCCAAACTCAAACCCCACAAGATCTCCCAGTTGCTACCTCAAAGGTCGATCACCAAGAACAAGAAGAAGAGAACAAGAATCTTAAGCTTACGATAACCAGTGGTCAACATGCAAATGAAGAAAATTTTTATTACTTGCAATCGCCCATAGGATGTTCTGAAGACATTATTATTGACCATGGAGATCCTTTCAAATTGAACCCAGAGAAAAGCCATGACAGAATAGATCTTCTCTTAGAGGAAGAGCCCCCGTGTTATTCTCAGCTCGAAAACCTCTCAACATCCAAATCGGAAGAACTAGACTTTTTCGACGAGCTAGAAGAGCTACCCATGTCTTCATCGTTGTTAAACTTGATAAGGAACAATTTTTCCGATGAAAGAATTCCTGTTGCCCCTTCTTGA 807 0.4201 MKKRGYSAMDDTASPKLESVASSELKPQNQYFKKRKMVQKTVVAVRIRENVSKVKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCPAKKQVERCRTDASMLIVTYTSTHNHPAPDLPSVTNLAPQSKESQTQTPQDLPVATSKVDHQEQEEENKNLKLTITSGQHANEENFYYLQSPIGCSEDIIIDHGDPFKLNPEKSHDRIDLLLEEEPPCYSQLENLSTSKSEELDFFDELEELPMSSSLLNLIRNNFSDERIPVAPS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0433 268 ProSiteProfiles WRKY domain profile. 55 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g0433 268 Pfam WRKY DNA -binding domain 62 119 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g0433 268 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 247 IPR044810 GO:0003700
Glsi11g0433 268 SMART WRKY_cls 60 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g0433 268 MobiDBLite consensus disorder prediction 116 159 - -
Glsi11g0433 268 MobiDBLite consensus disorder prediction 116 149 - -
Glsi11g0433 268 MobiDBLite consensus disorder prediction 1 25 - -
Glsi11g0433 268 FunFam WRKY transcription factor 65 44 121 - -
Glsi11g0433 268 Gene3D WRKY domain 44 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g0433 268 SUPERFAMILY WRKY DNA-binding domain 56 121 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0433 Glsi-ChrGlsi11 2860532 2861634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0433 27 121 WRKY Transcription Factor Family AT2G34830 62.500 2.28e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi11g0433 WRKY 6.3e-25 CL0274