Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0428 ATGTCGGTGCTCCCAGTTTCTATCTCAATCGGTGTGTTGAAAAAGGTTCAAGATTTGATGCCGGAATGGTTGCTTATATTATCTTGCTTGGTGTTTATGGCAAATTCTAATGCATTTGATAAAACACTGGAACCCCCACCATTATCTCCAGCAAGACCACCTTCGGCTGCTATAGTTGTTCATGATCTGCCGCTACCAGCAAATCTCCATGTGCAGAACCATTTGCTGTCCCATGATGGACCAATTCCAACAATATCACCAGCCAATCCTCCTTTGTATGGTCCTTTCATAAGTACTGGTCACCCTCCCGCAGGTTCACATTTATCCAGACCAGTCATGAAGAGGAGCGAATTAAGACCTCCGGTGTCTGGATTTAGAGACATCGCCCCTATGTATTCCACTGCTGGCACAATTCCTTCTGGTTTGGCTCAGCCATCATTGTCCCCTTATGTTTCTAATTGTTGTAAACAAGACATGGTGTTGAAGCGAGGGAGTAAGAGCTGCCTCTGTGTGTATCCCATAAAGCTAGACCTTCTCCTTTTGAATGTCTCTCAAAGCCCTGATCTTGTTCTTGATGAATTAGCTACCCGACTTGGGTTGCAAACTACTCAGATTGAACTGATAAATTTTTATGTACTCAGCTTATTAACATTAAATATATCAATGGATATCACTCCACATAAAGGGATCAGTTTCTCTGCCATTGAAGCATCTAAAATAAACTCTTCTCTTTCAATGCATAAGATTCAACTAGATCCTAGATTAGTGGGTGATTACAAACTTCTTAATATCACATGGTTTCAGCCTCCACCTCCATCTCAAGCTACTACTTTTGCCACATCACCTATAAAAGCTCCTATGTTCGATACACCAGCAGCTACATCTCTAAGTGATTCAAATAGTGGAAGGCATTCAAATTTGTATCCTGTTCTTGGAATTGGTGCTGGCATAGTCTTCATTGCCATCATATCTGTACTTATACTTTGTTTATGCACATTGAGGCCAAAGACCAAAAGACCTCCTATAGAAACTGAAAAACCAAGGACAGAAGGTGCACTTTCAGCTGTGGGGTCTTTTCCCCACCCAACCAGTTCACGATTTATTGCTTATGAGGAACTTAAAGAAGCAACAAACAACTTTGAAGCGGCAAGCATACTCGGAGAAGGCGGGTTTGGTAGAGTTTTTAAAGGTGTGTTAAATGATGGTACTGCTGTAGCAATTAAGAGACTTACTAGTGGAGGGCAACAGGGGGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGTCGATTGCATCACCGTAATCTTGTAAAATTAGTGGGATTCTACAGCAATCGCGACTTGTCACAAAATCTACTTTGCTATGAGCTTGTCCCAAATGGAAGTTTGGAAGCCTGGCTTCATGGTCCCTTGGGGATAAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCGCTTGACGCTGCCAGAGGACTTGCATACCTACATGAAGACTCACAGCCCTGCGTTATACACAGAGATTTCAAGGCGTCCAACATATTACTCGAAAACAACTTTCACGCTAAAGTTGCAGATTTTGGTCTTGCTAAACAGGCACCTGAAGGCAGAGCTAATTACCTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACCGGACACCTTCTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTGGAACTGCTGACTGGAAGGAAACCAGTGGATATGTCACAGCCAGCTGGACAAGAGAACCTGGTCACTTGGGCAAGACCAGTCCTTAGAGACAAGGACCGGTTAGAAGAGCTTGCCGATCCAAGGCTTGGAGGAAAGTACCCAGAAGAAGATTTTGTCCGTGTTTGCACTGTTGCTGCAGCCTGTGTCGCTCCTGAAGCAAGCCAACGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATGACAGAATATAAATATTCCATGGTGGCCTCCTCCAATACACGGAATAACCTAAGACAGTCCTCTACCACTTTTGAGTCTGATGGGACATCTTCTATATTCTCTTCTGGTCCCTACTCTGGTCTAAGTGTCTATGACAACGACAACATTTCTAGGACAGCAGTTTTCTCTGAAGATCTTCATGAAGGACGATAA 2175 0.4354 MSVLPVSISIGVLKKVQDLMPEWLLILSCLVFMANSNAFDKTLEPPPLSPARPPSAAIVVHDLPLPANLHVQNHLLSHDGPIPTISPANPPLYGPFISTGHPPAGSHLSRPVMKRSELRPPVSGFRDIAPMYSTAGTIPSGLAQPSLSPYVSNCCKQDMVLKRGSKSCLCVYPIKLDLLLLNVSQSPDLVLDELATRLGLQTTQIELINFYVLSLLTLNISMDITPHKGISFSAIEASKINSSLSMHKIQLDPRLVGDYKLLNITWFQPPPPSQATTFATSPIKAPMFDTPAATSLSDSNSGRHSNLYPVLGIGAGIVFIAIISVLILCLCTLRPKTKRPPIETEKPRTEGALSAVGSFPHPTSSRFIAYEELKEATNNFEAASILGEGGFGRVFKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGFYSNRDLSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPVLRDKDRLEELADPRLGGKYPEEDFVRVCTVAAACVAPEASQRPTMGEVVQSLKMVQRMTEYKYSMVASSNTRNNLRQSSTTFESDGTSSIFSSGPYSGLSVYDNDNISRTAVFSEDLHEGR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0428 724 ProSiteProfiles Protein kinase domain profile. 380 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g0428 724 SUPERFAMILY Protein kinase-like (PK-like) 356 657 IPR011009 -
Glsi11g0428 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Glsi11g0428 724 FunFam Receptor-like serine/threonine-protein kinase ALE2 458 674 - -
Glsi11g0428 724 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Glsi11g0428 724 CDD STKc_IRAK 386 656 - -
Glsi11g0428 724 Gene3D Transferase(Phosphotransferase) domain 1 458 681 - -
Glsi11g0428 724 PANTHER OS01G0750732 PROTEIN 152 679 - -
Glsi11g0428 724 Pfam Protein tyrosine and serine/threonine kinase 383 655 IPR001245 GO:0004672|GO:0006468
Glsi11g0428 724 FunFam Receptor-like serine/threonine-protein kinase ALE2 360 457 - -
Glsi11g0428 724 Gene3D Phosphorylase Kinase; domain 1 346 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0428 Glsi-ChrGlsi11 2823361 2837057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0428 24 724 Receptor kinase-like Gene Family AT4G02010 68.227 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Glsi11g0428 PK_Tyr_Ser-Thr 8.7e-44 CL0016