Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0417 ATGGGAGTTTCTTCGCAGCCTTGCGTTGTTTCCCTGTCTCCGAAAGATCTGCTTCAGGGAACTGAAGAAAACAAAAATGCATCGTATGGGTATTTGTGGAGCAAAGTATTGGCAGCCCAAGGCATGAAGCGGAAGAAGTGCAAGAAAAGTGTCAAGAGCGGGACGCCAAGAAGGATTTTAATGAAGAGGAGGGCACGCTTAATAGAAGGTTGCAGAAGACGAGCCATAGGGATTAAGACAAGGGTGAGAACATTGAAGAGGCTTGTACCCAACAGCGAGTCCATGGGGTTGGATGGACTCTTCAGAGAGACAGCTGAATACATTTTGTCATTGCAAATGAGAGTGAGAGTCATGCAGATTATGGTTAATGTATTGGGAGGTTCCGATGAGTGA 393 0.4606 MGVSSQPCVVSLSPKDLLQGTEENKNASYGYLWSKVLAAQGMKRKKCKKSVKSGTPRRILMKRRARLIEGCRRRAIGIKTRVRTLKRLVPNSESMGLDGLFRETAEYILSLQMRVRVMQIMVNVLGGSDE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0417 130 CDD bHLH_AtIBH1_like 69 122 IPR044549 GO:0006355
Glsi11g0417 130 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 111 IPR011598 GO:0046983
Glsi11g0417 130 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 125 IPR036638 GO:0046983
Glsi11g0417 130 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 28 125 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0417 Glsi-ChrGlsi11 2759218 2759610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0417 60 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 53.521 5.08e-18 72.0