Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0391 ATGGGTTTTTATTCATCAGCATGTCCATCTGCTGAAGCAATAGTGAGAAGGGCTGTAAATAAAGCCGTTTCTCGCAACCCGGGCATCGCTGCTGGCTTGATCAGAATGCATTTTCACGACTGCTTTGTAAGGGGTTGTGATGGTTCTGTGTTACTAAAATCTACACCGGGTAACCCTTCTGAGAGAGATCACCGTGCCAACAATCCCAGCCTACGTGGTTTCGAAGTGATCGACGAAGCTAAGGCCCAAATTGAGGCCGTGTGTCCTCAGACCGTTTCGTGTGCAGACATTCTTGCTTTTGCCGCTCGAGACAGCGCTGGAAAAGTTGGAGGCATAAACTACGTCGTACCAGCAGGACGCAGAGATGGTCGCGTCTCGATTAAAGACGAAGTGACCCAAAATTTACCCCCACCTTCCTTGGATGCCAAGCAACTCGTTGACAACTTTGCCCGGAAAGGGTTGTCGGCGGACGAAATGGTGACACTTTCGGGAGCCCATTCTATTGGTGTATCGCGTTGTTCTTCCTTCTCCAATCGCCTCTACTCATTTAATGCCACTCATCCCCAAGATCCCTCAATGGACCCTCGATTTGCTGAATTTCTGAAAACCAAGTGTCCGCCACAAAGCAAGGACGGTGATAAAGTTCAAGCGGCGGTGCTCGATGCTGCGACGCCTAACCGTTTGGACAACAAGTACTACGTGGGACTGAAGAACCACCGTGGCTTGTTGACATCGGATCAGACTTTGCTGGGAAGCCAGTCAACAAGGCAAATGGTTGTGAACAATGCTAGAGATGGTTCAAGTTGGGCTGCGAAGTTCGGCGAGGCAATGGTGCACATGGGTTCCATAGATGTGTTAACAGGTTCAGAAGGCGAGATAAGGAGGCATTGCAGCGCCGTCAATTAA 906 0.5 MGFYSSACPSAEAIVRRAVNKAVSRNPGIAAGLIRMHFHDCFVRGCDGSVLLKSTPGNPSERDHRANNPSLRGFEVIDEAKAQIEAVCPQTVSCADILAFAARDSAGKVGGINYVVPAGRRDGRVSIKDEVTQNLPPPSLDAKQLVDNFARKGLSADEMVTLSGAHSIGVSRCSSFSNRLYSFNATHPQDPSMDPRFAEFLKTKCPPQSKDGDKVQAAVLDAATPNRLDNKYYVGLKNHRGLLTSDQTLLGSQSTRQMVVNNARDGSSWAAKFGEAMVHMGSIDVLTGSEGEIRRHCSAVN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0391 301 Gene3D Peroxidase, domain 2 136 280 - -
Glsi11g0391 301 ProSiteProfiles Plant heme peroxidase family profile. 1 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 FunFam Peroxidase 136 280 - -
Glsi11g0391 301 Gene3D - 2 301 - -
Glsi11g0391 301 PRINTS Haem peroxidase superfamily signature 30 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Haem peroxidase superfamily signature 92 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Haem peroxidase superfamily signature 110 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Haem peroxidase superfamily signature 158 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Haem peroxidase superfamily signature 221 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PANTHER PEROXIDASE 25-RELATED 1 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 FunFam Peroxidase 2 168 - -
Glsi11g0391 301 SUPERFAMILY Heme-dependent peroxidases 2 301 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 ProSitePatterns Peroxidases active site signature. 30 41 IPR019794 GO:0004601
Glsi11g0391 301 PRINTS Plant peroxidase signature 219 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Plant peroxidase signature 275 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Plant peroxidase signature 235 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Plant peroxidase signature 32 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Plant peroxidase signature 72 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Plant peroxidase signature 91 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Plant peroxidase signature 157 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Plant peroxidase signature 110 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 PRINTS Plant peroxidase signature 8 27 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 Pfam Peroxidase 15 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0391 301 ProSitePatterns Peroxidases proximal heme-ligand signature. 158 168 IPR019793 -
Glsi11g0391 301 CDD secretory_peroxidase 1 300 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0391 Glsi-ChrGlsi11 2605282 2606294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0391 2 301 Peroxidase AT4G36430 43.522 1.44e-88 266