Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0390 ATGGCCCCACGCGTTTCGGCGGCCAACTTGGTTCTAATCCTCTCATTTTCTTCAATAATAGCCTCGTCAGCGTCTCTGAGGGTGGGTTTTTATTCATCAGCATGTCCATCTGCTGAAGCAATAGTGAGAAGGGCTGTAAATAAAGCCGTTTCTCGCAACCCGGGCATTGCTGCTGGCTTGATCAGAATGCATTTTCACGACTGCTTTGTAAGGGGTTGTGATGGTTCTGTGTTACTAAAATCTACACCGGGTAACCCTTCTGAGAGAGATCACCGTGCCAACAATCCCAGCCTACGTGGTTTCGAAGTGATCGACGAAGCTAAGGCCCAAATTGAGGCCGTGTGTCCTCAGACCGTTTCGTGTGCAGACATTCTTGCTTTTGCCGCTCGAGACAGCGCTCAAAAAGTTGGAGGCATAAACTACGTCGTACAAGCAGGACGCAGGGATGGTCGCGTCTCGATTAAAGACGAAGTGACCCAAAATTTACCCCCACCTTCCTTGGATGCCAAGCAACTCGTTGACAATTTTGCCCGGAAAGGGTTGTCGGCGGACGAAATGGTGACACTTTCGGGAGCCCATTCTATTGGTGTATCGCGTTGTTCTTCCTTCTCCAATCGCCTCTACTCATTTAATGCCACTCATCCCCAAGATCCCTCAATGGACCCTCGATTTGCTGAATTTCTGAAAACCAAGTGTCCGCCACAAAGCAAGGACGGTGATAAAGTTCAAGCGGCGGTGCTCGATGCTGCGACGCCTAACCGTTTGGACAACAAGTACTACGTGGGACTGAAGAACCACCGTGGCTTGTTGACATCGGATCAGACTTTGCTGGGAAGCCAGTCAACAAGGCAAATGGTTGTGAACAATGCTAGAGATGGTTCAAGTTGGGCTGCGAAGTTCGGCGAGGCAATGGTGCACATGGGTTCCATAGATGTGTTAACAGGTTCAGAAGGCGAGATAAGGAGGCATTGCAGCGCCGTCAATTAA 987 0.4995 MAPRVSAANLVLILSFSSIIASSASLRVGFYSSACPSAEAIVRRAVNKAVSRNPGIAAGLIRMHFHDCFVRGCDGSVLLKSTPGNPSERDHRANNPSLRGFEVIDEAKAQIEAVCPQTVSCADILAFAARDSAQKVGGINYVVQAGRRDGRVSIKDEVTQNLPPPSLDAKQLVDNFARKGLSADEMVTLSGAHSIGVSRCSSFSNRLYSFNATHPQDPSMDPRFAEFLKTKCPPQSKDGDKVQAAVLDAATPNRLDNKYYVGLKNHRGLLTSDQTLLGSQSTRQMVVNNARDGSSWAAKFGEAMVHMGSIDVLTGSEGEIRRHCSAVN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0390 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 Gene3D Peroxidase, domain 2 163 307 - -
Glsi11g0390 328 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Glsi11g0390 328 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Glsi11g0390 328 Pfam Peroxidase 42 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 Gene3D - 29 328 - -
Glsi11g0390 328 FunFam Peroxidase 29 192 - -
Glsi11g0390 328 PANTHER PEROXIDASE 25-RELATED 16 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0390 328 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Glsi11g0390 328 FunFam Peroxidase 163 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0390 Glsi-ChrGlsi11 2581045 2582339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0390 11 328 Peroxidase AT1G14540 45.141 3.89e-89 268