Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0389 ATGATAGAGCCCATGGCCATACGCGTTTTGGCGGCCAACTTGGTTCTAATCCTCTCATTTTCTTCAATATTAGCCTCGTCAGCGTCTCTGAGGGTGGGTTTTTACTCATCAGCATGTCCATCTGCTGAAGCAATAGTGAGAAGGGCTGTAAATAAAGCCGTTTCTCGCAACCCGGGCATTGCTGCTGGCTTGATCAGAATGCATTTTCACGACTGCTTTGTAAGGGGTTGTGATGGTTCTGTGTTACTAAAATCTACACCGGGTAACCCTTCTGAGAGAGATCACCGTGCCAACAATCCCAGCCTACGTGGTTTCGAAGTGATCGACGAAGCTAAGGCCCAAATTGAGGCCGTGTGTCCTCAGACCGTTTCGTGTGCAGACATTCTTGCTTTTGCCGCTCGAGACAGCGCTCAAAAAGTTGGAGGCATAAACTACGTCGTACAAGCAGGGCGCAGAGATGGTCGTGTCTCGATTAAAGACGAAGTGCCACAAAATTTACCCCCGCCTTCCTTTGATGCCAAGCAACTCGTTGACAACTTTGCCAGGAAAGGGTTGTCGACGGACGAAATGGTGACACTTTCGGGAGCCCATTCTATTGGTGTATCGCGTTGTTCTTCCTTCTCCGATCGCCTCTACTCAGTTAATGCCACTCATCCCCAAGGTCCCTCAATGGACCCTCGATTTGCTGAATTTCTGAAAACCAAGTGTCCGCCACCAAGCAAGGAAGGTGGTAGAGATCCAGCGGTGGTGCTCGATGCTGCGACGCCTAACCGTTTGGACAACAAGTACTACGTGGGACTGAAGAACCACCGTGGCTTGTTGACATCGGATCAGACTTTGCTGGGAAGCCAGTCAACAAGGCAAATGGTTGTGAACAATGCTAGAGATGGATCAAGTTGGGCTGCGAAGTTCGGCGAGGCAATGGTGCACATGGGTTCCATAGATGTGTTAACAGGTTCAGAAGGCGAGATAAGGAGGCATTGCAGCGCTGTCAATTAA 999 0.4995 MIEPMAIRVLAANLVLILSFSSILASSASLRVGFYSSACPSAEAIVRRAVNKAVSRNPGIAAGLIRMHFHDCFVRGCDGSVLLKSTPGNPSERDHRANNPSLRGFEVIDEAKAQIEAVCPQTVSCADILAFAARDSAQKVGGINYVVQAGRRDGRVSIKDEVPQNLPPPSFDAKQLVDNFARKGLSTDEMVTLSGAHSIGVSRCSSFSDRLYSVNATHPQGPSMDPRFAEFLKTKCPPPSKEGGRDPAVVLDAATPNRLDNKYYVGLKNHRGLLTSDQTLLGSQSTRQMVVNNARDGSSWAAKFGEAMVHMGSIDVLTGSEGEIRRHCSAVN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0389 332 SUPERFAMILY Heme-dependent peroxidases 30 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 Pfam Peroxidase 46 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 FunFam Peroxidase 167 311 - -
Glsi11g0389 332 FunFam Peroxidase 33 191 - -
Glsi11g0389 332 PANTHER PEROXIDASE 25-RELATED 20 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Glsi11g0389 332 Gene3D Peroxidase, domain 2 167 311 - -
Glsi11g0389 332 ProSiteProfiles Plant heme peroxidase family profile. 29 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0389 332 Gene3D - 33 332 - -
Glsi11g0389 332 CDD secretory_peroxidase 31 331 IPR033905 GO:0004601|GO:0042744
Glsi11g0389 332 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0389 Glsi-ChrGlsi11 2554359 2555665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0389 15 332 Peroxidase AT1G14540 45.455 1.11e-89 269