Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0388 ATGGTTAGTCTACACTTGTGTCTAATGCTCTCCAGCTTGGTTCTAATCCTCTCATTTTCTTCAATATTAGCCTCGTCAGCGTCTCTGAGGGTGGGTTTTTATTCATCAGCATGTCCATCTGCTGAAGCAATAGTGAGAAGGGCTGTAAATAAAGCCGTTTCTCGCAACCCGGGCATTGCTGCTGGCTTGATCAGAATGCATTTTCACGACTGCTTTGTAAGGGGTTGTGATGGTTCTGTGTTACTAAAATCTACACCGGGTAACCCTTCTGAGAGAGATCACCGTGCCAACAATCCCAGCCTACGTGGTTTCGAAGTGATCGACGAAGCTAAGGCCCAAATTGAGGCCGTGTGTCCTCAGACCGTTTCGTGTGCAGACATTCTTGCTTTTGCCGCTCGAGACAGCGCTGGAAAAGTTGGAGGCATAAACTACGTCGTACCAGCAGGACGCAGAGATGGTCGTGTCTCGATTAAAGACGAAGTGACCCAAAATTTACCCCCACCTTCCTTTGATGCCAAGCAACTCGTTGACAATTTTGCCCGGAAAGGGTTGTCGGCGGACGAAATGGTTACACTTTCGGGAGCCCATTCTATTGGTGTATCGCGTTGTTCTTCCTTCTCCGATCGCCTCTACTCATTTAATGCCACTCATCCCCAAGATCCCTCAATGGACCCTCGATTTGCTGAATTTCTGAAAACCAAGTGTCCGCCACAAAGCAAGGACGGTGATAAAGTTCAAGCGGCGGTGCTCGATGCTGCGACGCCTAACCGTTTGGACAACAAGTACTACGTGGGACTGAAGAACCACCGTGGCTTGTTGACATCGGATCAGACTTTGCTGGGAAGCCAGTCAACAAGGCAAATGGTTGTGAACAATGCTAGAGATGGTTCAAGTTGGGCTGCGAAGTTCGGCGAGGCAATGGTGCACATGGGTTCCATAGATGTGTTAACAGGTTCAGAAGGCGAGATAAGAAGGCATTGCAGCGCCGTCAATTAA 996 0.49 MVSLHLCLMLSSLVLILSFSSILASSASLRVGFYSSACPSAEAIVRRAVNKAVSRNPGIAAGLIRMHFHDCFVRGCDGSVLLKSTPGNPSERDHRANNPSLRGFEVIDEAKAQIEAVCPQTVSCADILAFAARDSAGKVGGINYVVPAGRRDGRVSIKDEVTQNLPPPSFDAKQLVDNFARKGLSADEMVTLSGAHSIGVSRCSSFSDRLYSFNATHPQDPSMDPRFAEFLKTKCPPQSKDGDKVQAAVLDAATPNRLDNKYYVGLKNHRGLLTSDQTLLGSQSTRQMVVNNARDGSSWAAKFGEAMVHMGSIDVLTGSEGEIRRHCSAVN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0388 331 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Glsi11g0388 331 CDD secretory_peroxidase 30 330 IPR033905 GO:0004601|GO:0042744
Glsi11g0388 331 Gene3D - 32 331 - -
Glsi11g0388 331 Gene3D Peroxidase, domain 2 166 310 - -
Glsi11g0388 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Glsi11g0388 331 PANTHER PEROXIDASE 25-RELATED 15 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 ProSiteProfiles Plant heme peroxidase family profile. 28 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 FunFam Peroxidase 32 192 - -
Glsi11g0388 331 Pfam Peroxidase 45 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 SUPERFAMILY Heme-dependent peroxidases 29 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0388 331 FunFam Peroxidase 166 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0388 Glsi-ChrGlsi11 2541722 2542824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0388 12 331 Peroxidase AT4G11290 43.653 3.32e-88 266