Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0387 ATGTGTCTAATGCTCTCCAGCTTGGTTCTAATCCTCTCATTTTCTTCAATATTAGCCTCGTCAGCGTCTCTGAGGGTGGGTTTTTATTCATCAGCATGTCCATCTGCTGAAGCAATAGTGAGAAGGGCTGTAAATAAAGCCGTTTCTCGCAACCCGGGCATTGCTGCTGGCTTGATCAGAATGCATTTTCACGACTGCTTTGTAAGGGGTTGTGATGGTTCTGTGTTACTAAAATCTACACCGGGTAACCCTTCTGAGAGAGATCACCGTGCCAACAATCCCAGCCTACGTGGTTTCGAAGTGATCGACGAAGCTAAGGCCCAAATTGAGGCCGTGTGTCCTCAGACCGTTTCGTGTGCAGACATTCTTGCTTTTGCCGCTCGAGACAGCGCTCAAAAAGTTGGAGGCATAAACTACGTCGTACAAGCAGGGCGCAGAGATGGTCGTGTCTCGATTAAAGACGAAGTGCCACAAAATTTACCCCCGCCTTCCTTTGATGCCAAGCAACTCGTTGACAACTTTGCCAGGAAAGGGTTGTCGGCGGACGAAATGGTGACACTTTCGGGAGCCCATTCTATTGGTGTATCGCGTTGTTCTTCCTTCTCCGATCGCCTCTACTCAGTTAATGCCACTCATCCCCAAGGTCCCTCAATGGACCCTCGATTTGCTGAATTTCTGAAAACCAAGTGTCCGCCACCAAGCAAGGAAGGTGGTAGAGATCCAGCGGTGGTGCTCGATGCTGCGACGCCTAACCGTTTGGACAACAAGTACTACGTGGGACTGAAGAACCACCGTGGCTTGTTGACATCGGATCAGACTTTGCTGGGAAGCCAGTCAACAAGGCAAATGGTTGTGAACAATGCTAGAGATGGTTCAAGTTGGGCTGCGAAGTTCGGCGAGGCAATGGTGCACATGGGTTCCATAGACGTGTTAACAGGTTCAGAAGGCGAGATAAGGAGGCATTGCAGCGCCGTCAATTAA 981 0.4985 MCLMLSSLVLILSFSSILASSASLRVGFYSSACPSAEAIVRRAVNKAVSRNPGIAAGLIRMHFHDCFVRGCDGSVLLKSTPGNPSERDHRANNPSLRGFEVIDEAKAQIEAVCPQTVSCADILAFAARDSAQKVGGINYVVQAGRRDGRVSIKDEVPQNLPPPSFDAKQLVDNFARKGLSADEMVTLSGAHSIGVSRCSSFSDRLYSVNATHPQGPSMDPRFAEFLKTKCPPPSKEGGRDPAVVLDAATPNRLDNKYYVGLKNHRGLLTSDQTLLGSQSTRQMVVNNARDGSSWAAKFGEAMVHMGSIDVLTGSEGEIRRHCSAVN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0387 326 FunFam Peroxidase 27 193 - -
Glsi11g0387 326 ProSiteProfiles Plant heme peroxidase family profile. 23 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Glsi11g0387 326 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 SUPERFAMILY Heme-dependent peroxidases 24 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 Gene3D Peroxidase, domain 2 161 305 - -
Glsi11g0387 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601|GO:0042744
Glsi11g0387 326 Gene3D - 27 326 - -
Glsi11g0387 326 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Glsi11g0387 326 Pfam Peroxidase 40 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PANTHER PEROXIDASE 25-RELATED 12 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 FunFam Peroxidase 161 305 - -
Glsi11g0387 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g0387 326 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0387 Glsi-ChrGlsi11 2524042 2525129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0387 9 326 Peroxidase AT1G14540 45.141 8.48e-89 267