Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0367 ATGTATACTGAGGATGCTCGAGGGGATGAATGTGGACTGGAGTCAATTCACGGGCAAATTCAGGTGGACAAAAGGACATTAATATATGAAACCTTGTCTGTTAATGGTGCCCGGGCTCGTCTCTCATCAGAGCTACAATGGACGTTGAAAAGCATCGAAATTTGCATGATGGAATATAAAAATCCAGATGTTCATGGATTTGAACTCTACATGCAGGAGCAAAAAGGTGATTGTAGGACTTTTGGCAGCAGTATTCGTCCATCTAGCCAATCAAGGAAAATTTCCATAGGAGTTATGGCAGATCCTGTGGCTAAAACAAGTTATGGAGTGCTGAAAGTAGAAGGGTCTATCATGCCAAATACAGAAAGGGTGATCTCTAATGGAGGAAATTTTAATGGAGAAAAGAGCAAGGTTGAAGGAGTGACGGTTTCCCTTAATATGAAGCAAAGTGGAGTACCAGAAGAGGTGAAGTGTTATGACAAACCTGATAGAGTAGAGTCTGCACCTGCGAAATATTCGGTTCAGCCTTTCTCAAATCAGACGTCAATTTTCCATTCCAGTAATTACAACCAGAAAAAGTTTGATGTGATTGTCAGCAAAAGGAATGGAAAGAAAGACGGGACTCCAGAAAGGGTAGAGGAAGTTACATTTAAGATTGCACAGGAAGTCTTCGAGTCTGATAAAAAGCTAGAAGACAAAAGAATTAAAACAGAAAACAGAACTGAAAATTTGAGGATGCAGATCAGGCAAATATTGGGGACCAAATCTTCCGCTAAGACTCATCATTCAGATTCTCAGACTTGTAACATGAATAAGGAAAGATTGCCGCTCGCGCAGCGTTGTGATCAAAAGGATGATAAGATCAGACAGAATTCCAATACTATAAAAACTGATGTTAAAAATCCCGATCATACTAGTAGGAGGCCAGTAACTCGTTCTTGGAGCCGAAAGAGAGCGTCAGCCAAAATGCAGCCATCAAAAAGGAAAAGTGTCTCATCTTCAAACGAGAAAGAGAAACATAAAGAAAAAAGTATCTTCTCTTCTAAAGAAAGATGGACTGGGATGGGAAATGCTTTTGTATATGATGATTCCTCAATGTCATTAAGGAAAAACAGTCAGAGAAAGAATTCCAGAATTGGTCCACGTAAGATATGCTTCCTTGAAAATGATACAGCAGATAAACTATGTCAAAAAACTTCGAAGACTGATATACCGCCGCATGATGAGGAAAGATTTTCATTTGGGAATAAAATGGGAGGATTTCATAGTTGCTTATCCGATCATCAGAAAGAGTGTCCTCAGTCAGAGAAAATTGTCCAAGAAGAATTTTACCAGTCACCGACAACTAAGAAGACAGATCAGCTTGGGCAACTTGAGGGTTCTGAAAAAGGGAACCAACAAGAAGATAGAAGTAACCCAGTATTTGAGAATGTTGCTAGTCCCCAAAATAATTTTCGAAGTCCTACATTTCGACTTAAGACGCCTACTGTAAGTTCTTCCCCTAGCTCAACGCGAAATAGGGACCAGAAGGTAAGTGATTTGAGCAGTCCTGCATCAACTGACAGAAGATTTTCTCTGGGAACTATCCATAATTTAAGGACTTCCCAGACTTGGGAGCCACGCTGTAATAGACTAATGGCGCAGAGGCAATCTTCCGACATTGAGGAGGTCAAGTATTCTCTTCCCAGAAAGGCTGCATCTTTTGTGAAAGAGAAAGAAGCGCAGGATGGTCTGTCTGATTCATCATCTGAAGAGAGGAACTTTCAGGGATCTCAAGAAGGTTCAAGAGAAAGACATGTTGCTGAGGAGCAAACTTTTATGCTTCGTCCAAGCAAAAAGTTGTGTAGGAATGAAGGCACTAAATTTCACGATAAAGATCCTGCTTCACCCTCTTCAAAAGGCATAACTTCACTTTGGACAGGAGAAATTCATTGGGTCCATGAAGCTTCTGAGCAGAATCAAGAGGACGAATCTGTTAGGGTTGTAGAGCTCTTTGCCTTGGAACTAGGAAGAGTTAAGAGCAAACTTGAGTCATTGACAAGTCAGAAATCCTCAGAAATTCTGATGTCTGTTGCTGAAGAGATACATCTCCAGCTGCAGAATGTCCATTCGCAGATTCAAACAGACATAGGAAAGCTTAAAAGTCTCAGTAAATCAAAGAGAAAACGGCTAGAAACAAGATTTGAAGGCCATCAGAAGCAGTTGACGCCGATCTACGAAAAATTCAAGGAAGAGGTTAATCTGCATCTCAGGGATTGCAGAAGCACTGTTGAATGTCTGGAGGCAGACCAGATAGAGATCAAGGGAGTCCTGAAAAAGCAAAGAGCGTCACATAGGAAGCTTCTATCGCAAGTTGAAGAAGCAGTGGAGATCCAACTCAATGATGCTCAAAGGAAAATCACAGCCATCCATGAGGCAAGCTTTATTTTATACGTACAAGTCCAACGTGCTATTGGGAAAGGGAAAACTGCTCCAGTTGAAGCACGTTATTGCTTTGTGTTTGAAAGAGGGGACGGCAACGATTTTCTTGAGCTGGTTTGGCAAAATGGTCAAATTGTAGTGCAAAAGGGTTCACCAAATAGAACACGAAAGAATCCCTCGGGCATTGACCCTTCCCGTGAAGATCCCTGCATCACAAAAAGATCAAGGTTAAGCACTTCGTACTCGCTTTTGGATTTCGCAGGTCACAGGGACCCTCCATCGGACTCTTCACATCAAAATTTTGATTTGCCATACCCCAAAAGCAACAGTTTTGGTAAGCTTGGAAAAGAATATTGTAAGCCCTGTGCAGGGGGAGCACCAGCAATTGGTGGAATGCCAAACCCCAACTCACACAAGCAGGAGTTGGGATGCAATGGGGGAACTGAAAAGGAGCAAACAGCTTTAGCTGCTCACAAAGCAAAACAAGCACCCTTAGTCGCAAAAAGTGAGGAAACAGTACCCGACCACCACTCTGAAGCGGTTGGACACAAGAGTCATAACCAAAACTCAAGCTTAGCGGCACATCGAGATAGAGCGAAACCAAAACCTGCTGCTGAGTCTTATAATGAACCCTTGGTAGCATCTTCTTCTTTATGCTCTCTTGGAGCCTCGAATGATCCAACCCTTCGTAATAGGAAACATGAGGACTACACCGATGACTCTACGTATATTAGTGATAACGACGAAGAACCAGAAGATGTTATAAGGGAAACGCGTGGTCGGGAGGGTTCAAGATTACACAAGAGGAGCAGGAACACAGAGATACATAATTTATCTGAGAGGAAGCGAAGAGATAAGATTAACAAGAAGATGCGTGCATTAAAAGAGCTTATACCCAATTGCGATAAGATGGACAAGGCTTCAATGCTTGACGATGCCATCGATTATCTTAAGACCCTTAAGCTTCAGTTACAGGTTATGTCAATGGGTAGTGGGCTTTGTATGCCTCTTATGATGTTACCAGCTGGAGCGCATCAGCTAATGGGAGGTGGAATGAGTTTGAGGCCAGGCATGGGCATCCCTTGCAGCCTACCTCCTCAGTTCCCTATTCCACAACTTCACATGCTTGGTTTCCCAAATCAAGTTCTTCCCATGCCAATGTCCCATCCACCTTTCATTCCTATGCCTCCAAAGCCATCTACACAACCCAATCTCTCTTCCCACTTTAAAACTTTAGATGCCACAGATCTTAATGCGCAGCTTGTTTGTGCTATGCAAGCATCGAAGCAGGGAACAAAATAA 3723 0.4247 MYTEDARGDECGLESIHGQIQVDKRTLIYETLSVNGARARLSSELQWTLKSIEICMMEYKNPDVHGFELYMQEQKGDCRTFGSSIRPSSQSRKISIGVMADPVAKTSYGVLKVEGSIMPNTERVISNGGNFNGEKSKVEGVTVSLNMKQSGVPEEVKCYDKPDRVESAPAKYSVQPFSNQTSIFHSSNYNQKKFDVIVSKRNGKKDGTPERVEEVTFKIAQEVFESDKKLEDKRIKTENRTENLRMQIRQILGTKSSAKTHHSDSQTCNMNKERLPLAQRCDQKDDKIRQNSNTIKTDVKNPDHTSRRPVTRSWSRKRASAKMQPSKRKSVSSSNEKEKHKEKSIFSSKERWTGMGNAFVYDDSSMSLRKNSQRKNSRIGPRKICFLENDTADKLCQKTSKTDIPPHDEERFSFGNKMGGFHSCLSDHQKECPQSEKIVQEEFYQSPTTKKTDQLGQLEGSEKGNQQEDRSNPVFENVASPQNNFRSPTFRLKTPTVSSSPSSTRNRDQKVSDLSSPASTDRRFSLGTIHNLRTSQTWEPRCNRLMAQRQSSDIEEVKYSLPRKAASFVKEKEAQDGLSDSSSEERNFQGSQEGSRERHVAEEQTFMLRPSKKLCRNEGTKFHDKDPASPSSKGITSLWTGEIHWVHEASEQNQEDESVRVVELFALELGRVKSKLESLTSQKSSEILMSVAEEIHLQLQNVHSQIQTDIGKLKSLSKSKRKRLETRFEGHQKQLTPIYEKFKEEVNLHLRDCRSTVECLEADQIEIKGVLKKQRASHRKLLSQVEEAVEIQLNDAQRKITAIHEASFILYVQVQRAIGKGKTAPVEARYCFVFERGDGNDFLELVWQNGQIVVQKGSPNRTRKNPSGIDPSREDPCITKRSRLSTSYSLLDFAGHRDPPSDSSHQNFDLPYPKSNSFGKLGKEYCKPCAGGAPAIGGMPNPNSHKQELGCNGGTEKEQTALAAHKAKQAPLVAKSEETVPDHHSEAVGHKSHNQNSSLAAHRDRAKPKPAAESYNEPLVASSSLCSLGASNDPTLRNRKHEDYTDDSTYISDNDEEPEDVIRETRGREGSRLHKRSRNTEIHNLSERKRRDKINKKMRALKELIPNCDKMDKASMLDDAIDYLKTLKLQLQVMSMGSGLCMPLMMLPAGAHQLMGGGMSLRPGMGIPCSLPPQFPIPQLHMLGFPNQVLPMPMSHPPFIPMPPKPSTQPNLSSHFKTLDATDLNAQLVCAMQASKQGTK 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0367 1240 Pfam Meiosis-specific protein ASY3-like 77 126 IPR046845 -
Glsi11g0367 1240 Pfam Meiosis-specific protein ASY3-like 201 807 IPR046845 -
Glsi11g0367 1240 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY3 74 806 IPR037731 GO:0051321
Glsi11g0367 1240 CDD bHLH_AtPIF_like 1078 1140 IPR047265 -
Glsi11g0367 1240 SMART finulus 1084 1133 IPR011598 GO:0046983
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 570 602 - -
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 331 347 - -
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 277 293 - -
Glsi11g0367 1240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1078 1127 IPR011598 GO:0046983
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 997 1011 - -
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 252 273 - -
Glsi11g0367 1240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1075 1138 IPR036638 GO:0046983
Glsi11g0367 1240 Gene3D - 1074 1136 IPR036638 GO:0046983
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 892 911 - -
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 252 347 - -
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 1017 1034 - -
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 856 877 - -
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 442 528 - -
Glsi11g0367 1240 MobiDBLite consensus disorder prediction 968 1056 - -
Glsi11g0367 1240 FunFam Basic helix-loop-helix transcription factor 1073 1136 - -
Glsi11g0367 1240 Pfam Helix-loop-helix DNA-binding domain 1083 1127 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0367 Glsi-ChrGlsi11 2337193 2350652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0367 1017 1216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46970 44.762 9.93e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi11g0367 HLH 1e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0367 11 2337193 2350652 Glsi11g0367 11 2337193 2350652 ECH