Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0357 ATGGCAATGAAGCTGATTTTGATAGCCGTTAGTTTTGCTTGCTTCGTTTCGGGGGTTATCTCCACTGGATCTGAGAGATATTCTGTGCTTTCTTACTTGGAGAACGATTTCGTCGCGGCAAAATCTTCCTCCTCGCCCCAACCTCTCCTGGTTGGCCTCACTCTTATTCAAGGAGCTGCTTCTAAAGGAGCCGTATGTTTGGATGGAACACTGCCTGGTTACCATTTGCATCGTGGATTCGGATCTGGTGCTAATAGTTGGCTCATTCAACTGGAGGGAGGAGGGTGGTGTAATACCATAAAGAGCTGTGTTTTTAGAAAAACTACTCGCCGTGGTTCCTCAAAACACATGGAACCGCAAATACCATTTACAGGAATTTTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTCAACTGGAACAGAGTCAAATTGCGGTATTGTGATGGGGCATCTTTCAGTGGAGACAGTCAGAATGAGGCTGCACACCTTCAATTTCGAGGACAAAAAATATGGCTGGTTGCCATGGAGGAGTTAATGTCCAAGGGAATGCAGAATGCCAACCAGGCCCTTCTTTCTGGATGCTCTGCGGGTGGTCTGGCATCCATCATACATTGTGATGAATTCCGGGGCTTGTTTCCAAAAAGTACCAAAGTGAAATGTCTGAGCGATGCAGGGTTTTTTCTTGATGTAATTGATGTCTCTGGGGGACATACTCTGAGGAATCTGTTTGAAAGTGTAGTTCACTTACAGGGAGTACAAAAAAATCTGCCAAAGAGTTGTCTCAACCAACTGGATACAACATCGTGTTTCTTTCCTCAGAATTTGGTCAACCATGTTGAGACTCCATTGTTTCTACTCAACGCAGCCTATGATGCATGGCAGCTCCAAGCCAGTTTAGCCCCACCTTCAGCTGACCCCCATGGCTCTTGGAATGGCTGCAAATCAAACCATGCCAATTGTAATTCATCTCAAATTCAGTTCCTGCAAGACTTCAGAAATCAAATGCTTAATGCTGTGAAAGAGTTCTCAAGGTCATCTCAAACTGGATTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAAAGACAGGATACATGGTTTGCTGATGACTCTCCCCTAATTAGGAACAAGCCAATTGCAATTGCTGTTGGAGACTGGTATTTTGATCGAGAAGCTGTCAAAGCTATTGACTGTGCTTACCCCTGCGACAACACCTGTCATAATTTGGTGTTCAAGTGA 1245 0.4418 MAMKLILIAVSFACFVSGVISTGSERYSVLSYLENDFVAAKSSSSPQPLLVGLTLIQGAASKGAVCLDGTLPGYHLHRGFGSGANSWLIQLEGGGWCNTIKSCVFRKTTRRGSSKHMEPQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSQNEAAHLQFRGQKIWLVAMEELMSKGMQNANQALLSGCSAGGLASIIHCDEFRGLFPKSTKVKCLSDAGFFLDVIDVSGGHTLRNLFESVVHLQGVQKNLPKSCLNQLDTTSCFFPQNLVNHVETPLFLLNAAYDAWQLQASLAPPSADPHGSWNGCKSNHANCNSSQIQFLQDFRNQMLNAVKEFSRSSQTGLFINSCFAHCQSERQDTWFADDSPLIRNKPIAIAVGDWYFDREAVKAIDCAYPCDNTCHNLVFK 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0357 414 PANTHER NOTUM-RELATED 33 410 IPR004963 GO:0016787
Glsi11g0357 414 Pfam Pectinacetylesterase 46 393 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0357 Glsi-ChrGlsi11 2298222 2302619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0357 15 414 Carbohydrate Esterase AT2G46930 69.403 0.0 596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3519 02 82222785 82225735 Glsi11g0357 11 2298222 2302619 CCT
Glsi02g3550 02 82454157 82458643 Glsi11g0357 11 2298222 2302619 ECH
Glsi11g0357 11 2298222 2302619 Glsi02g3550 02 82454157 82458643 ECH
Glsi11g0357 11 2298222 2302619 Glsi11g0357 11 2298222 2302619 ECH