Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0355 ATGTTCCATTCACTGACTTTGGGATTTATAGATCTGTGTGTGGATGTGCTCGATCCACTGCTTCATTTGTATTTTAAGCAGTACCCTCAAGGGGTTTATTGGGTTTTCTCGAAGTTGGATTTCTCGTTTATATCTGTATTTGTTGATGGTGCACAGTTACAGGAACCATACATCAGTATCTCAGGGTCAAGGGTATATTCAATAATGGGTAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCTTTTAATGGGAAAAGTGGGGTTGACTTGGAGTTTCTAGAGCCATTAGACGAAGGATTAGGCCATTCTTTCTGTTATGTAAGGCCATCAATATTTGAATCTCCTGCCATTACCCCCTCAAACTCTGAGAGGTTCACAGTTGATTCGAGTACCCTTGATTCTGAAACGTTGAGTGGATCGTTTAGGCATGATAGCATAGAAGATTCCTCTGGCATGCACAAACCAGGCAAAAGCTTCCCAGAAACCACATTCAAAACGATTTCAGGGGCTTCAGTCAGCGCCAATGTTTCAACAGCAAGGACTGGTAACCAGAGTGCATTATTTGCTAGTGATGTCCAAGAGCCTGCTGCATCATTTGAGGGAACCTCCTCATTTGCTGCAATCCCTTTACAGCCTGTTCCCCGTGGTTCTGGACCTTTGAATGGTTTCATGTCTGGACCTCTAGAGAGAGGTTTTGCTTCAGGTCCATTGGATAAGGGTGGTGGTTTCATGTCTGGGCCAATAGAGAAGGGAGTTATGTCAGGTCCTCTTGATGCCACTGACAAATCCAACTTTTCTGCGCCGCTTGCATGTGGTCGTCAAAGGCCGCGCCTACAACACCTCATGAGAAGTATGAGTGGACCAATGAAAAGCACTTTTTCTCGGACCTTCTCTAAGCATTCTATGGGTGGCAGCTGGATGCAGCGATTATTCTTTCATCCAGTGACCCAATTGGCCTGGCATGCACGAGATGCAAAGTTTCGACCTGAAGTTTCTAGAAGCTGTAATGAAGTTGGACCATCTGAAGGGGAGTATCAACATACACACAATTTGCAGTGGGCTCATGGTAAGGCTGGTGAAGATAGGGTTCATGTCGTGCTTTCTGAAGAACAAGGATGGTTGTTTATTGGTATATATGATGGATTTAGCGGACCAGATGCACCTGAATTTCTGATGAGCCATCTATATAGATTTATAGACAAGGAACTGGAAGGGTTGCTTTGGGATTATGAATACAATCCTGTAGGTCCACTTAAACCTGAGGCAATTAAAACTGGAAATGCTGTGGTTGCTTCAGAACAATGCAAGGAGGAACTGTCAGATAATTATACTAATTCAAATCAAGACAGTGCTTGTTTTATAGAATCTTTTTCTTGTCCTGTAATTGTCAAGGATTTATCATCTAACACTGAGATAACTGAGGAGAACGTTGAAGTTAAGGTGAATGTTGAACGCCCATTTCCTGATTGTGGGAGTCCTGTTATATCTGGTAATGTTCCTGTTTCTATTCCACCTGGACAGTTAACTGGTCAAGGTAGAAAAAGCATTCGGCTGTATGAGCTCTTTCAGATGGAATCTTGGGATGAGAAGGGTTTCTTGCCAATCTCTGAACATGGAAAGGATTCTTCCGTTCCTGGGGAATCAACACAAGTGGGGCGGATGAGATCTTTCTCGTCTAATGCAAAAGAAGATAGTTCTAGACCCCTAGATGAAGGTCCCACCACGTCAGGAGAAAATGGAGGCATTGGTTTTAAATCAACAAACCAGGAGTCAGCGGCTGGTTTTTCTGTATCAGGACAAAGGCAGAATACGAGAAAGTCATTCATTGGCTCAAAAATTAGAAAAATGTACAGGAAGCAGAAGTCCTTGCGTAAGAAGCTTTTTCCTTGGAGTTTTGATTGGCATAGGGAGGAAACTTGCGTTGATGAGAAAATAGTAGAAACGTCAGGACCCATTAGAAAATGCAAATCCGGAGTAGTTGATCATGGTGCAGTTTTAAGAGCAATGGCTCAAGCTCTTGAAAGAACAGAAGAGGCATACATGGAAATGGTAGAGAATAATCTGGACATAAATCCAGAGCTTGCTCTAATGGGGTCATGTGTTTTAGTAATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTCGTGTAATTTTGGCTCAAGAGAGACCAAATGATCGTCATCCTAACCCTAGTTTTGTCAAGGATGATGCAAGGCATAGAAATCGATCTAGAGAGTCATTAGTACGCATGGAGCTGGATAGAATTTCGGAGGAGTCCCCAATTCACAACCAAATCAGTCATGCTAACAAGATGAACAAAAATAGAGAGATATCCATTTGCAGATTAAAAATGAGGGCTGTTCAGCTTTCCACAGATCACAGCACGAGTATTGACGAGGAAGTTTTTAGAGTAAAGGCAGAACACCCTGATGATGATCAATCCATATTGAATGACCGAGTGAAAGGGCAATTAAAAGTCACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCATCTTTCAATGAAGCTCTACTGGAGATGTTTCAAGTTGATTTTGTGGGCACTGCTCCTTATTTAAGTTGCATTCCTTCTGTTTTTCATCACCGGCTTTCCTCTAGTGATCGGTTCTTGGTACTCTCTTCCGATGGGCTTTATCAGTACTTCAGCAATGAAGAGGTAGTTGCCCATGTGACATGGTTTATGGAAAATGTCCCTGAAGGTGACCCTGCACAATACCTGATTTCAGAGCTTCTCTTCCGTGCTGCTAAAAAGAATGGAATGGATTTTCACGAATTGCTTGATATTCCTCATGGAGATCGACGCAAATATCACGATGATGTTTCGGTTATGGTGGTTTCCCTGGAGGGAAGGATTTGGAGATCATCTGGATGA 2910 0.4285 MFHSLTLGFIDLCVDVLDPLLHLYFKQYPQGVYWVFSKLDFSFISVFVDGAQLQEPYISISGSRVYSIMGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHDSIEDSSGMHKPGKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLACGRQRPRLQHLMRSMSGPMKSTFSRTFSKHSMGGSWMQRLFFHPVTQLAWHARDAKFRPEVSRSCNEVGPSEGEYQHTHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPEFLMSHLYRFIDKELEGLLWDYEYNPVGPLKPEAIKTGNAVVASEQCKEELSDNYTNSNQDSACFIESFSCPVIVKDLSSNTEITEENVEVKVNVERPFPDCGSPVISGNVPVSIPPGQLTGQGRKSIRLYELFQMESWDEKGFLPISEHGKDSSVPGESTQVGRMRSFSSNAKEDSSRPLDEGPTTSGENGGIGFKSTNQESAAGFSVSGQRQNTRKSFIGSKIRKMYRKQKSLRKKLFPWSFDWHREETCVDEKIVETSGPIRKCKSGVVDHGAVLRAMAQALERTEEAYMEMVENNLDINPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNPSFVKDDARHRNRSRESLVRMELDRISEESPIHNQISHANKMNKNREISICRLKMRAVQLSTDHSTSIDEEVFRVKAEHPDDDQSILNDRVKGQLKVTRAFGAGFLKRPSFNEALLEMFQVDFVGTAPYLSCIPSVFHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLISELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0355 969 MobiDBLite consensus disorder prediction 727 747 - -
Glsi11g0355 969 Gene3D - 598 966 IPR036457 -
Glsi11g0355 969 ProSiteProfiles PPM-type phosphatase domain profile. 345 960 IPR001932 -
Glsi11g0355 969 MobiDBLite consensus disorder prediction 543 564 - -
Glsi11g0355 969 SMART PP2C_4 345 958 IPR001932 -
Glsi11g0355 969 FunFam Protein phosphatase 2C 32 322 493 - -
Glsi11g0355 969 SUPERFAMILY PP2C-like 357 961 IPR036457 -
Glsi11g0355 969 MobiDBLite consensus disorder prediction 137 159 - -
Glsi11g0355 969 PANTHER PROTEIN PHOSPHATASE 2C 347 959 IPR015655 GO:0004722|GO:0006470
Glsi11g0355 969 CDD PP2Cc 666 960 IPR001932 -
Glsi11g0355 969 Coils Coil 667 687 - -
Glsi11g0355 969 Pfam Protein phosphatase 2C 785 928 IPR001932 -
Glsi11g0355 969 MobiDBLite consensus disorder prediction 534 588 - -
Glsi11g0355 969 Gene3D - 325 491 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0355 Glsi-ChrGlsi11 2274147 2279965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0355 69 969 PP2C-type Phosphatase Gene Family AT2G46920 64.945 0.0 1147