Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0313 ATGGAGAGAGACAGAAGGAAGAGGAAACTAGAGAATGAAGAGGAAGAAAACGAAGAGCAGAAGATGGAGAAGTTCTTAGCCTTGATAAGAAGCACGAAGGATGTACGTGAGCTCCTGTCTAAGGGCAAAGAAGATAAGAAGGATGATGAAGAGAAAGCAAAAGGTTGGAACCCAACGTTTAAACCAGAAGATTTCATTGATTTCGAAGGGCTGGTATGGACTCCTTTTCCAAACCCAGCTGCTTCCTCTTCTACCAAAGAGGTTGTAGAGAAAGCACCTCCAGCTGAAGCAACCCCACCCCAAAATCAAGATAAAGAGAAAGCAATAGCTATATTGTCCGGTTTAGGAGTTACAGGAAACCAGATATTGTACTTCTTGGGGCTAAAATATTCAACTGCCACAATAGCATGTGCACTGTCCAATTTGCTCCCAGCTTTCACTTTTATTCTTGCAGTCCTCTCCAGGCAAGAGTACGTGAGAATAAGGACGAGGGCTGGGCAAGCTATGGTGTTAGGGACTGTTCTGGGTGTGGGGGGAGCTCTTTTATTATCATTTTACCATGGCAAAGCCATCAATTTAGGGGAATCTGGGATTGACTGGGAATATGCTGAGAAAGTAGAAGGAACAAGCTCCGCTGCCAAAACAAACTCGCTTCTAGGCCCTCTCGTATTAATTGGAAGTGCTTTTATTTGGGCATTATGGTTCATAATCCAAGCAGACTTGTGCAAGAAGTTTTCAGCTCCTTATACGAGCAGCGCCTACATGTGTCTTATGGCAAGTATTGAATGTGTGGTCATTGCTTTATGTTTTGAACACAGGCCCTCGGCTTGGTCACTCAACAATTCTATGAGACTCACCTCTGCACTTTATGCGGGTATTGTTTGCACTGGGCTAGCGTGTTGCCTCATGTCGTGGACTATTGAGAGGAAAGGTCCTCTTTATGTTTCTGTGTTCACCCCCTTGCAGCTTGTCATCACTGCTATTGTCAGTTGGGCTCTACTTCGGGAGAAGTTATATGTTGGAACTGTCATAGGGTCTCTCGTGATAGTTTTGGGGCTGTATTCTGTTTTGTGGGGAAAGAACAAGGAGAAGAATGAGAAAGACTCTATTCAAGAGGCAGAAGCAATGAAGGAGAACGGGAAAGATACCAGGAACGACCTTGAGTTGCAAGCTCATAAGGCTTCAAATGGGAACCACGATACTGCTAATTAG 1212 0.4447 MERDRRKRKLENEEEENEEQKMEKFLALIRSTKDVRELLSKGKEDKKDDEEKAKGWNPTFKPEDFIDFEGLVWTPFPNPAASSSTKEVVEKAPPAEATPPQNQDKEKAIAILSGLGVTGNQILYFLGLKYSTATIACALSNLLPAFTFILAVLSRQEYVRIRTRAGQAMVLGTVLGVGGALLLSFYHGKAINLGESGIDWEYAEKVEGTSSAAKTNSLLGPLVLIGSAFIWALWFIIQADLCKKFSAPYTSSAYMCLMASIECVVIALCFEHRPSAWSLNNSMRLTSALYAGIVCTGLACCLMSWTIERKGPLYVSVFTPLQLVITAIVSWALLREKLYVGTVIGSLVIVLGLYSVLWGKNKEKNEKDSIQEAEAMKENGKDTRNDLELQAHKASNGNHDTAN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0313 403 MobiDBLite consensus disorder prediction 374 403 - -
Glsi11g0313 403 MobiDBLite consensus disorder prediction 1 22 - -
Glsi11g0313 403 MobiDBLite consensus disorder prediction 82 103 - -
Glsi11g0313 403 Coils Coil 1 23 - -
Glsi11g0313 403 Pfam EamA-like transporter family 105 184 IPR000620 GO:0016020
Glsi11g0313 403 Pfam EamA-like transporter family 219 357 IPR000620 GO:0016020
Glsi11g0313 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 363 - -
Glsi11g0313 403 Coils Coil 370 390 - -
Glsi11g0313 403 Pfam NPR1 interacting 14 106 IPR031425 GO:0010112
Glsi11g0313 403 PANTHER WAT1-RELATED PROTEIN 109 369 IPR030184 GO:0016020|GO:0022857
Glsi11g0313 403 MobiDBLite consensus disorder prediction 374 389 - -
Glsi11g0313 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 107 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0313 Glsi-ChrGlsi11 2041456 2047691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0313 116 401 Nodulin-like Gene Family AT1G09380 53.448 6.82e-101 303