Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0278 ATGGAGACCGAGAAGAGACGTTCCAAAGGAAGCTTCCTCAACTTGTTTGATTGGAATGGAAAATCTCGAAAGAAGCTATTCTCTGACAACCCTAACTTACCTGAAGTTTCAAAGCAAGGAAAGGAAAATGTGGAGAACATGGCAAAGTCACAACTCAATAGGATAAATGTGGATGAAAATGGAGCAAGTCCAAGTGGTATGGCAAGTTGTGATTTTAATTGTGCGCTATCAACTAATAGTGATGAAGGATGTAGCACTAAAGCCCCTGGGTTAGTGGCAAGACTCATGGGTTTGGATTCATTGCCCGCTTCAACTGGCACTGAGCTCTCCTCCACTACATTATATTGCTCTAACTCTCTTGGATCTTGTCATGAGGGTGCTCTTGATTCGTTGAATGACTATCAACCTGTAAACTATGTAAACATGCCACTTAAGCTGGAGAGGTCTTCTTGGGATGTCACAGAATCAAGGGCACAGAAAGTGGGAAACCGGCCAATCAAGAGATTCCAAACTGAGATGTTGCCTCCAAAGTCAGCTAAACCAATTCCAGTTACTCACAATAAACTCTTGTCTCCTATCAAGAGTTCTGGTTTTATCCCACCAAAGAATGCAACTCACATAATGGAGGCAGCTGCCAAGATTATTGAGGCAAGCCCCCGGCCATATATGAAGAATAAAAAGTCATCAATTGGGCCTTCGTCTGTTCCATTGAGAATTCTTAATTTGAAAGAGAAATTGGAAGCTGCACACTATGCATCCATGCCTGAAAAGCCTGTGGATCCAGGCACTGCTAACCCTGTTATAGGCAAGCCTAGTGGCAGGAGCAATAATTTATATAAATGCACTCCAGCTTTGAAAGTTTCAGGGGATTCAGAAAAAAATAGTTCTCGCCATTTGGGGAGTAAAGGAAAACCAGTTTCACTTGCAATACAAGCCAAGGCCAACGTTCAGAGTACAGATACATTGACTTCAAGTGGTAATAGGGGATACATGAAGCATAAAGAACAGAATGAGATGAAATCAAACCAATTCTCGAGGAGCCAGAAACCAATTATACAGCAGGCCATGCAGCAGAGAACTTGTACAAGCCGGAATAAAACTGTGCTTGGGCAGAATAATCAAAAGCAGAATAGTGTAACCAACAAAGGTACACCAACTTCAAAAGTTGATGCCAATAAGCCAACTACACGAGTTCGGTCTTCAGAAAGCTCCACTGGATCAAGGAAGACAACAAAAGAGGGTGCTGTAAATGGCCATATTGGGCCCAAAAGGTCAAGCAGAAGGGCAACTGATACTCAAAAGGAGTTGTCACTCTCCAAAACAAAGAGTGTTTCCCAAAAGAAAAGGTATATCTGCAGGGACGATTTTGCTGAGACCAGAGATCCTAATAATGCTGTGAATAATTATGAAAGTAAGTCCATAAAATGCAATATTACAACTGATGGGAGTATAAATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTCATTTCATTCACATTTACATCTCCCTTGAGAAGAAACATGCCTGAGTCGCAGTCCTCAACCCAGTTGATGGGGACGAGTAACAATATGGATGTTAATTCTTTTGGCCATAGTGATAAGCTTTATCCTGAAAAATTAGCATTATCTCCTCCTGGGATACATATGATTGATGGTGATGGTTTGAGCGTCCTGTTGGAGAAAAAGCTGCAAGAATTGACGTCTAGGATTAACTTACCTCAACATAGCCTAGCTACAGAAGGCTCATCTGCTGGTTTACAGTCCAGTTTGCAAGACAAAGTTCTCAATGTGGTAAACACCATGTCAAGGGAACAAGACAGAAGCTTTCACCCTGACCTGCTTAGTAATAAATTACACAGCATCCATGATTATGGCTGTTCAAGTGATGATCTGGTGCATAACATGAATCAGCAGCTACAGAAATTAGAAGCATTGGAAGAGCCCAGCTGTAGCGGCAATGGTGAAACTGGAAATGATCCAGGTTGTCAGTATTCCAGATCTGTTACAGTTTTGGAAACTCCTTTTGTCAGTGAAAGTTACTTGGATAGCGAAGATAGTACATATGGCAGCACATGTTATTCATGGATACAAGATGAAGAGGTGTCTAATTTTTCTCCAATAGATGAATCTGTACCTCTTGAAAATGGAGTGAATTGGTCTGAGCAAAGCTCTTCCATATTGGCAGGGGGGTATATGACCATTAAACAATTAAATAGTATATCAAATTTTGCAGATTTAAAAAGGTCAAGGATCACTGAACTTGAATATGTGAAGGATATACTTAGCAGTGCAGAATTGATGGCAGAAGATTTTGTGATGGGTCAAACAAATAAGGTCATAATACCAAATCTCTTTGATCTGTTGGAAAATCGGAGCAGTGGAACAGAAAACTATCAAGAAGAGGACTCCAAGCTCGAGAGAAAGGTTTGGTTTGACTGTGTAAATGAGTGCCTGGAATTGAGATGCAGGCAATCTTTTGTTGGAAGCTGCAAAACATGGCCCAGATGGGTGGCAGTGGTTCAGAGGAAGGGCAAATTGGCAGAAGAATTGTACAGGGAGATTCTGGGTTTTAAAAGCATGGAGGAGGTAATGGTAGACGAGCTTGTCAACAAGGACATGAGCACTGGATATGGTAGATGGCTTGATTTTGACATGGAAGCCTCTGAAAAGGTTCTAGAGATTGAGTGGGAAATATCAACTTGTTTGATTGAAGAATTAATTTCTGATCTGTTGGTTGTTTAA 2748 0.4105 METEKRRSKGSFLNLFDWNGKSRKKLFSDNPNLPEVSKQGKENVENMAKSQLNRINVDENGASPSGMASCDFNCALSTNSDEGCSTKAPGLVARLMGLDSLPASTGTELSSTTLYCSNSLGSCHEGALDSLNDYQPVNYVNMPLKLERSSWDVTESRAQKVGNRPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSSGFIPPKNATHIMEAAAKIIEASPRPYMKNKKSSIGPSSVPLRILNLKEKLEAAHYASMPEKPVDPGTANPVIGKPSGRSNNLYKCTPALKVSGDSEKNSSRHLGSKGKPVSLAIQAKANVQSTDTLTSSGNRGYMKHKEQNEMKSNQFSRSQKPIIQQAMQQRTCTSRNKTVLGQNNQKQNSVTNKGTPTSKVDANKPTTRVRSSESSTGSRKTTKEGAVNGHIGPKRSSRRATDTQKELSLSKTKSVSQKKRYICRDDFAETRDPNNAVNNYESKSIKCNITTDGSINQDAFNMKESKDVISFTFTSPLRRNMPESQSSTQLMGTSNNMDVNSFGHSDKLYPEKLALSPPGIHMIDGDGLSVLLEKKLQELTSRINLPQHSLATEGSSAGLQSSLQDKVLNVVNTMSREQDRSFHPDLLSNKLHSIHDYGCSSDDLVHNMNQQLQKLEALEEPSCSGNGETGNDPGCQYSRSVTVLETPFVSESYLDSEDSTYGSTCYSWIQDEEVSNFSPIDESVPLENGVNWSEQSSSILAGGYMTIKQLNSISNFADLKRSRITELEYVKDILSSAELMAEDFVMGQTNKVIIPNLFDLLENRSSGTENYQEEDSKLERKVWFDCVNECLELRCRQSFVGSCKTWPRWVAVVQRKGKLAEELYREILGFKSMEEVMVDELVNKDMSTGYGRWLDFDMEASEKVLEIEWEISTCLIEELISDLLVV 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0278 915 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 911 - -
Glsi11g0278 915 MobiDBLite consensus disorder prediction 334 442 - -
Glsi11g0278 915 MobiDBLite consensus disorder prediction 341 412 - -
Glsi11g0278 915 Pfam Domain of unknown function (DUF4378) 755 907 IPR025486 -
Glsi11g0278 915 MobiDBLite consensus disorder prediction 252 306 - -
Glsi11g0278 915 Pfam DUF761-associated sequence motif 77 104 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0278 Glsi-ChrGlsi11 1860569 1864961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0278 3 913 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 33.262 1.09e-111 362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0278 11 1860569 1864961 Glsi11g0278 11 1860569 1864961 ECH