Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0255 ATGGGGATCGATCTCAAAGCTGGTGGTAAGAGCAAGAAGACCAAAAGAACAGCACCCAAGTCCAATGATATCTACCTCAAGCTCTTGGTCAAGCTTTATCGCTTCCTAGTCCGGAGAACTGGAAGCAATTTCAATGCTGTAGTACTGAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCACTTTCTTTGTCAAGGTTGATCAAGTTTATGAAGGGAAAGGAAGGCAAAATTGCTGTGATTGTTGGAACTGTGACTGATGATATAAGGGCGTATGAAGTTCCACCCTTGAAAGTTACAGCACTCCGGTTTACAGAGACAGCGCGGGCAAGAATAGAAAAGGCTGGTGGTGAGTGCTTGACGTTTGATCAGCTGGCTCTTAGGGCCCCTCTGGGACAGAACACGGCCCTTCTTAGAGGCCCGAAGAATGCTCGGGAAGCTGTGAAGCATTTTGGTCCTGCTCCTGGTGTGCCACACAGCCACACCAAGCCTTATGTGCAATCTAAGGGAAGGAAGTTCGAGAGGGCCAGAGGAAGGAGGAACAGCAGAGGATTTAAGGTTTAA 564 0.4823 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKPPLSLSRLIKFMKGKEGKIAVIVGTVTDDIRAYEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTALLRGPKNAREAVKHFGPAPGVPHSHTKPYVQSKGRKFERARGRRNSRGFKV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0255 187 FunFam 60S ribosomal protein L18 1 187 - -
Glsi11g0255 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Glsi11g0255 187 MobiDBLite consensus disorder prediction 151 187 - -
Glsi11g0255 187 MobiDBLite consensus disorder prediction 173 187 - -
Glsi11g0255 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Glsi11g0255 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Glsi11g0255 187 Gene3D - 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0255 Glsi-ChrGlsi11 1740446 1742296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0255 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.032 3.32e-104 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0255 11 1740446 1742296 Glsi11g0255 11 1740446 1742296 CCT
Glsi11g0255 11 1740446 1742296 Glsi11g0255 11 1740446 1742296 ECH