Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0249 ATGGGTCTAACCAAATACATCCTATTATCCTTCCTTGTCGACTACCAGCGTCGAGATGTTCTGTTGTTTGGGGCCGCTGATGATCCAATTCCTCTTCTGGGTGGGAAGAATTTGATAATTGGTGTGCCTAAGAAATCTGGTTTTACCGAGTTTGTGGATGCACAACTTAGTTCTACTAATAAGACCCAATTAGTCCAGATTTCTGGCTACTCCATAGACGTTTTCAGCGCTGCAGTAGCTTCTTTGCGAGGTTTAGGTTACAATATTTCTATTGAGTTTACACCTTTCGTAAACGAATCTGGAAAGAGTGCTGGGCCTTACAACAGACTTTTGGACCAGATTTATTTCAATAAGTACGACGCTGTGGTGGGAGACGTGACGATTTTGGCAAATCGATCAAAGTACGTAGATTTTACCCTACCATATGTGGAGTCTGATGTGAAGATGCTTGTAAAAATTCGAAAAAATGGACACTTGAATATGTGGATCTTTTTACGACCTTTTAGTTGGGATCTCTGGTTGTTCATAATTGCTTTCTGTATTTTCATAGGAGGTAGTATAAGGTTTATGGAAGGTGAGGTAAACAGAGATGCGGGATCTGAAAGTTCACTAAGTGGGGATCAGTTTTCCAGGGTATCAAGCTTGTTGCTTCCTTTGACACGAGTGGTCTTTCCTGAAAGTAAATCTTAA 690 0.4072 MGLTKYILLSFLVDYQRRDVLLFGAADDPIPLLGGKNLIIGVPKKSGFTEFVDAQLSSTNKTQLVQISGYSIDVFSAAVASLRGLGYNISIEFTPFVNESGKSAGPYNRLLDQIYFNKYDAVVGDVTILANRSKYVDFTLPYVESDVKMLVKIRKNGHLNMWIFLRPFSWDLWLFIIAFCIFIGGSIRFMEGEVNRDAGSESSLSGDQFSRVSSLLLPLTRVVFPESKS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0249 229 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 196 IPR015683 -
Glsi11g0249 229 FunFam Glutamate receptor 34 159 - -
Glsi11g0249 229 Pfam Ligated ion channel L-glutamate- and glycine-binding site 60 153 IPR019594 GO:0004970|GO:0016020
Glsi11g0249 229 SUPERFAMILY Periplasmic binding protein-like II 27 177 - -
Glsi11g0249 229 SMART GluR_14 37 221 IPR001320 GO:0015276|GO:0016020
Glsi11g0249 229 Gene3D - 38 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0249 Glsi-ChrGlsi11 1665507 1666488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0249 35 197 Ion Channels AT2G24710 41.104 2.26e-35 130