Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0237 ATGGGTTGTGGTTCTGAGGTTCTCCGCCCCATCTTTATTATCATCCTCTTGATGCTCCTATCATTACAAACAACACACATTTTGACTGTGGATGCTCTGTTGAATGCAGCAGGAAACTTCCATATCCATGGCCTACCACTGCCACAGATGTATTTTATGAAGGAGAATGGACAAGAAAATGAATACCAGATTAAGAAAATCTCAGGACAGGATGAGAATGAAGAGAAGGAAGCTCTGATAGTGGAAAAGTTCAGAGCTTTACTTGGACTCAAGAGTTTCCACACCAGAAGGCCATCCAATGGCGATTCTGTATTTGTCTCCCCATCGCCTTCGCCTTCACCCAGCGTTGAAGCTGAGGCTCCATCTCCATCTCCAGCTCCTCTTCCGTTACCGCACGTATATGCTCATCCCCGTCCTCCACGGCATCATTCGCATAGGAATCTACCAGCTCACAAGTTTCAACGTGAAGATAGAGGCAGAGCTAAAACAACATTGGTAGTTGTCCTTGTCTCTGTGGGAGTTGCTACAGCGATTTGCGCTCTTGTGCTTATCTGGGTCTTCAGGAAATTCAGATATCACACAAAGAAAACCAAAAGGACAATGCCACTCTTTAGCAAGAACAGAGGAACTGGAGGTACTTATCAAAATTCATCAAGCCAGGTGGGTAAAAACTCTGCCCTAGATCTGTTTTATCTTGATTCTTTAGGCGAGGATATAGAGCAACACACTTGCAGGTTGAAACAAACTTCTGACACAGTAGATACAACCTCAAATCATAGCTCCCCAAACTGTACAATTTATGAGAAGATAGAGCCAAATCACGAAGCGATTAGCTCAGAATATGAAAATGCCAGTAGTTCTTCCACAAAAGAAATTCTTTCTATTCACGAGGATGTGGAATCACTGAAATGTGAATCCGAATCTGATGGTGGCAACTCTTCTTCTGGTGATGAAATTATTGCCGTGGAATGCCATTCATCAGATAACGAAAGTTTTCATTCCTTTGTTGATTCGCACTCATCAAATGTCAGACTTTCCAATGCTTCCGCTGGTAGTCAAAGTGAGACACTGTCTCTGTCCCCCCAAACATCGCAGTCTAATTCTAATAGTACGCCAATTCGATTAACTTCAAAGATAGAATCTTCTCCATCACCATATATTCCAAAACAGGAAGAGCAAAACATTGGTGAGTGTTTAGAATGTCCGCAAGCCTCCAACCCCCCACCACCGCCTCCACCTCCACCTCCACCCCTACAAATGCCATTGTTTTCTTTGCATTCTCTTACTTCTTCATCTAGAATTTCCTCTCAGCCTCCACTTGCTTCAATAATTCATAATTTACCATCTCCAAGAAATTTAGATTCTTACTCAGGATTGAATCAAAGTCTAGAAAATGAGTTGCCTTCTCCTTCTCAACCTCATCCTGCAAGGTGTGCTCCCAGCATTCCCCCGCCACCATGTCCACCTTCATACTATAAAGGAAATAGCAACAACGTGAAAACTCCACCTCCTCCGCCATCTCAACTTCCTCAATTTACGCCACTCGGCAAAGATGGAGCACCACTGCCAAAACTTAAACCACTTCACTGGGACAAAGTAAGAGCTGCCCCAGATCGCACAATGGTTTGGGATAAGATACGATCCAGCTCATTTGAGTTGGATGAGGAAATGATCGAGTCACTTTTTGGCTACAATTTACAAAATTCAATGAAGAACGACGAGACAAAGAGCAAAAGCCCTTCTCCAAGCAAGCATGTACTCGACCCGAAAAGGCTGCAGAACATAACAATACTCTCAAAAGCTCTGAATGTGACGGTTGAGCAAGCGTGTGAGGCCCTAATACAAGGGAAGGGCTTATCTTTACAACAACTAGAGGCACTGGTGAAGATGGTACCCACCAAGGACGAAGAGGCTAAGCTCTCAAGTTATAAAGGAGACATTAATGAATTAGGGTCCGCGGAAAAGTTTGTAAGAGCAATGCTTAGCGTACCATTTGCCTTTTTACGTGTCGAAGCCATGCTTTATAGAGAAACTTTTGAAGATGAAATTGTCCACCTCAGGAACTCTTTTTCAATGCTGGAGGAGGCGTGCAAAGAACTACGATCAAGCAGGCTCTTCTTGAAATTACTTGAAGCTGTGCTCAAAACAGGCAACCGAATGAATGTTGGGACAATAAGAGGAGGTGCCAGAGCCTTTAAGCTCGACGCCCTTCTCAAGCTTGCCGATGTCAAGGGAACTGATGGGAAAACAACGTTACTCCATTTCGTTGTTCAGGAGATTGTCCGGTCAGAAGGGATTAGAGTTTCAGACAGCATAATGGGGAAAATCAGCCAGAAAAGTAAGAATAGAACAGAGGAAGAGAAGGAAGATGATTACAGAAGAATGGGATTAGAACTCGTTTCTGGTCTGAGTACTGAGTTATACAATGTGAAGAAGACAGCAACAATTGACTTGGACGTTCTTGCCAGCTCTGTATCAAACCTATCAGATGGAATGTCCAAGCTGCAACATCTAGTACAGGAATTGCGTACGGATGAAAAAAGTGAAAACTTTGTCAATTCGATGAAGTCCTTCCTGAATTATGCAGATAGAAATCTGAGGGACTTAAAAGGAGATGAAGATAAAGTCCTAGCCCGTGTCAAAGAAATCACAGAGTATTTTCATGGGTATGTGAGCAAAGAAGACGCCAACCCACTTCGGATATTTGTTATTGTAAGAGACTTTCTGGGCATGCTAGATAATGTGTGTAAAGAGCTTAGAAGGTCCAAAATTCCCCGCATCCCAAATCCTCTCGCTCCATTCAGCCAACTGCAAGTGAGGGTTGAAATTGAGTCAGTGTTTGATGGGATTGATTTGTCAGATGCCTTGAATTGGGACTTGTTCAAGAAGACCACGAGGCCAGTTAGAAAAGGTGAAAGAACCTTAAGAAAGGTTTGCCGTGAACTAGGGAGATTTGTCCTGTCGGGCATATTCCACCTGCTCAATGTGCCTGGAATTGAGATTACTTTTGAGGTTGATACCAATGGTATCCTGCATGTGAAAGCAGCAAAGAAATCGGAATCAATCACTATCATCAATGATAAAGGGCGTGATTAG 3096 0.4325 MGCGSEVLRPIFIIILLMLLSLQTTHILTVDALLNAAGNFHIHGLPLPQMYFMKENGQENEYQIKKISGQDENEEKEALIVEKFRALLGLKSFHTRRPSNGDSVFVSPSPSPSPSVEAEAPSPSPAPLPLPHVYAHPRPPRHHSHRNLPAHKFQREDRGRAKTTLVVVLVSVGVATAICALVLIWVFRKFRYHTKKTKRTMPLFSKNRGTGGTYQNSSSQVGKNSALDLFYLDSLGEDIEQHTCRLKQTSDTVDTTSNHSSPNCTIYEKIEPNHEAISSEYENASSSSTKEILSIHEDVESLKCESESDGGNSSSGDEIIAVECHSSDNESFHSFVDSHSSNVRLSNASAGSQSETLSLSPQTSQSNSNSTPIRLTSKIESSPSPYIPKQEEQNIGECLECPQASNPPPPPPPPPPPLQMPLFSLHSLTSSSRISSQPPLASIIHNLPSPRNLDSYSGLNQSLENELPSPSQPHPARCAPSIPPPPCPPSYYKGNSNNVKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPDRTMVWDKIRSSSFELDEEMIESLFGYNLQNSMKNDETKSKSPSPSKHVLDPKRLQNITILSKALNVTVEQACEALIQGKGLSLQQLEALVKMVPTKDEEAKLSSYKGDINELGSAEKFVRAMLSVPFAFLRVEAMLYRETFEDEIVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQKSKNRTEEEKEDDYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSDGMSKLQHLVQELRTDEKSENFVNSMKSFLNYADRNLRDLKGDEDKVLARVKEITEYFHGYVSKEDANPLRIFVIVRDFLGMLDNVCKELRRSKIPRIPNPLAPFSQLQVRVEIESVFDGIDLSDALNWDLFKKTTRPVRKGERTLRKVCRELGRFVLSGIFHLLNVPGIEITFEVDTNGILHVKAAKKSESITIINDKGRD 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0237 1031 MobiDBLite consensus disorder prediction 346 389 - -
Glsi11g0237 1031 MobiDBLite consensus disorder prediction 346 423 - -
Glsi11g0237 1031 MobiDBLite consensus disorder prediction 99 156 - -
Glsi11g0237 1031 SMART it6_source 515 927 IPR015425 -
Glsi11g0237 1031 MobiDBLite consensus disorder prediction 114 135 - -
Glsi11g0237 1031 MobiDBLite consensus disorder prediction 403 421 - -
Glsi11g0237 1031 MobiDBLite consensus disorder prediction 454 469 - -
Glsi11g0237 1031 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 966 1029 IPR029047 -
Glsi11g0237 1031 SUPERFAMILY Formin homology 2 domain (FH2 domain) 484 922 - -
Glsi11g0237 1031 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 962 1030 IPR029047 -
Glsi11g0237 1031 Pfam Formin Homology 2 Domain 519 912 IPR015425 -
Glsi11g0237 1031 Gene3D Formin, FH2 domain 539 926 IPR042201 -
Glsi11g0237 1031 PANTHER FORMIN-RELATED 86 923 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Glsi11g0237 1031 MobiDBLite consensus disorder prediction 454 525 - -
Glsi11g0237 1031 Pfam Hsp70 protein 968 1022 IPR013126 GO:0005524|GO:0140662
Glsi11g0237 1031 MobiDBLite consensus disorder prediction 99 113 - -
Glsi11g0237 1031 MobiDBLite consensus disorder prediction 473 491 - -
Glsi11g0237 1031 ProSiteProfiles Formin homology-2 (FH2) domain profile. 515 938 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0237 Glsi-ChrGlsi11 1595933 1601062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0237 500 934 FH2 protein (formin) Gene Family AT3G05470 74.715 0.0 666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0237 11 1595933 1601062 Glsi11g0237 11 1595933 1601062 CCT
Glsi11g0237 11 1595933 1601062 Glsi11g0237 11 1595933 1601062 ECH