Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0225 ATGAATCGAGTCAGCTTTCTGCTGGAAATATTTGAGTGCTGTTTAATACCAGATTTTCTCCCTGGATTGATGCTGTACTTTGTTGTAGTGTATTCGAATTTGTTCTCCTTTTCCTTTTTACATCTTTTTCGGGGTGCGGTGAAGGGGTTACGTACTCTGGATTCTATGGATGTTGTGAAGCTCGAAATAGATAAAGAATTTATGGCGCCAACAAGGAAATCCAGAAGTGTAAATAAGCGGTTTTCAAGTTTAAATGAGGTCTCTCCTGATAAATATGGAGTTAACTCAAATAAAAATATGCAACGGGTGTTAATCTCATTTCATAGAAGTTCCTGTCTTATAACTAATTTATTCCTGGCTATTGTGCTGCATGCTCTGGATGTGTCTTCTGCACAGAAGAAAAAATTGTCTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAGCTAGAGCGTTTTTATGAAGCATACAGGAAGTACGGGAAAGACTGGAAGAAGGTGGCTGCTATTGTACGTAACAGATCCACTGAAATGGTGGAGGCTCTTTACAATATGAATCGGGCATATTTATCTCTCCCAGAAGGGACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACGGATCATTATAATGTGCTGGAAGGGAGTGATAGTGAAAGGGAGAGCAGTGATGCACCAGGATCTCAAAAACTTTTGAAACGGAAGCGTGGAAAAGTTCACCTTAGTTTCTCAAAAGATTCTGTCCAATGTCAGTCGACTACTTCCATTGATGATTGCCTCTCTTTATTGAAGAGAAGACACTTTGATGGTAGCCAGCCTCGTGCAGTTGGGAAAAGGACACCCCGCATCCCAGTTTCCTACTCATATAAAAAAAATGATAGGGATAATTTTGTTTTGCCTATTAAAAGAGGCCTGAGGTCAGAGGTTAATGCCAATGATGATGAAGTTGCACATGTTGCAGCTCTGGCATTAACTGAGGCTGCACAAAGAGGGGGCTCTCCCCATATTTCTCAGACACAATACACAAGATCAGAGCAGAAGTCCTCTCCCGTCCAGAGCTGGGAAATAATGCACCAACAGTCCGAGATAGCTCATGCCAAGTCTCATGATGCTACTTTGGATGAAGAGTGCTTGGAAGGTTGTATAGAAAGCAGGGGAGCTGAAAATGGAGAATATGCTAGAGATACTAGTTCCTTCATGGGCATGGAAGGTGTTGGCACAGTTGAAGTACAACAGAAGGGGAAGAAAATTTACAGAAAGAAAGAGACAGTGGAAAATGTTAGAAACCATCAGCTTGATGATGGTGGAGAAGCATGTAGTGGCACTGAAGGAGGAATCAATTTTAATTCTTTGAAGGAAAAGGTTGATATTGAGGTTACTAATGCAAAACCTGAGCAATTCTCTCTTAAAGGTGAGAGGAAAAGAAGCAAGAAACTTTTTTTTGGAGATGAAAGCTCCGCCTTGGATGCTTTGCAAACTTTGGCTGATCTGTCTCTAATGATGCCTGTGTCTAATATGGAATCTGAATCACCTGTCCAGTTGAACGAAGAAAGAATGATTGTTGATAAAGATGATAAGTCTGCTTTACCTGAAGCTACTTTTAGAAGCCGAAACAGAGACAAAATGAAACTCCCAGTTCCAAAACAAAAGGTTCTTCATGCAGATCCTGGAGTTGAGACTTTGATCACCAGAAAATCTAAACTTGGAAGGGAGTTGGAAAATGACACTAATGCTTTTGCAGAATCAAAAGAGCAGCTTCCATCTACTGATAGAACATGGAAAAGAAAGCGCAAGTCTGTGGCCTCAAAGGTATCAAATGCAAAGCTGGATTTTCGTTCAAGTTATTCCTTGAATAATGAGGCTGTAGTTGATGAAGAGAACAAACCAATGATTAAAGGAAAACACACTGGTGAAGTTTTCACTCTACCAAAACAGTTGAAGTCTGTGAGATCATCAGAGAGTTCCTTGTATAGTGATCAGAAAGATGTAACAGTATTAACTGCAGAAGTTCCACTTGCAAGTGAAGTTAATTTACCAACTAAACAAAGAAGTAGACGAAAAACAGGTCTACAGAGAACTTTCATGGAAAAAGAGAAGTTTTCTGATGACATGTTGAAAAATCAACGTAGTAAATGCTCTACTGGTCTCCAAGACAGGGTATCATATCTAAAGGAAATGCTTTCTGGTTGCTTGTCATCTTATATGGTTCGCAGATGGTGTACTTTTGAATTTTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAGAGAGAGTTCATAGAGTACTTAAACCATGTTGGACTAGGGAATATCCCAAGGCTAACTCATGTTGAGTGGAGTGTTATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAGCATTTTCTATGTGAAGAAAGACAAAAACTTGAACAGTATCGGGAATCTGTTAGGAAACATTACACTGAACTGCACACCGGTATCAGGGATGGACTTCCAACAGATTTGGCAAGACCTTTATTTGTTGGGCAACGAGTAATTGCTATTCACCCAAAATCAAGAGAGGTTCATGATGGGAGTGTGCTTACTGTTGATCATGACAAATGCAGGGTTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCATGGAAAGATTTGTTTCAAGTTTAGGGGTAGGAATAGGCTTAGAAGTGTTGGTTTCGGTGGTAATTCTATTTTTGGGTTCAAGAGCTATTGGAATGGTGGTTGCTAAATTTATGGTTTTGGTGGTAGCACTGTTTTTGGGTTCAAGAGCTATTGGGATGGGGGCTGCTGGATTTGTAGTGCTGGATATTGATTGTATGCCTGTGAATCCGTTGGATAATATGCCAGAAGCTCTGAGGAGACAGATTGGTGCTGGCAAAGTTTCTTGTCTGAGTAATCAGCCCCAGATGAATGGAAGTTCAAATTTTGGGGGGTGTGGGACATGTGCTTCAGGTGGACCACTGGAGAAGGCATCCACCCCTTCAAAGGTAAAGCAGGGAAAGGGGGATGTTCATTATGCCATTGCCCAAACAAAGGCTGATTCCATTGACAACATTGATACACAACTAGAAGCATATGCTCAACCTTGTATATTGACACATCATCAAGCTAGAGAAGCTGATATACGTGCCCTTTCTGAACTGACTCGTGCTCTAAATAAAAAGGAAAAATTGTTAATGGAGCTTAGAAATGCAAATGGTGACATATTGGAAAGCCAAAATGACATAGACTGCTTTAAAGATTCCGAGTCTTTCAAGAAGCATTATGCCACGGTACTTGTACAGCTAAAGGAAGCCAGTGGGCAGGTTTCTTCTGCGCTTCTTCGGTTGAGGCAACGAAATACTTATCCAGAAAACTCTCTGTCGCCATGGGTAAAGCCCCATGCAAGTTTCAACATTCACGATGGCCTTCCCTGTACATTGAATAGTTCTTTAACACAAGAGATAGGGTCAAGTGTTATTGAAATTATCAAAGGATCCAAGCTAAGAGCACATGCCATGGTGGATGCTGCAATTCAGGCATTGTCTTCGACAAAAGAAGGTGAAGATGCTTTCATGAGGATTGGGCAGGTATTGGATTCTGTTGATTATCAGCAGTTGGCCTTGTACTCTAGGTTACCTGTGATCAGGTCCCAAGAGCAAGTGAATGGCAGTTTTGATCACTATAGTCAGTCAATTTGCTGTGCATCAGAGCCTTTACATAGTGATGCATCTGGTCCGAAATTGGTTAATGATTCTGACAAAGTTGATACTCAAATTCCTTCAGAGCTCATAACTTCCTGTGTTGCTACATTGATCATGATTCAGACTTGTACTGAACGACAGTACCCTCCGGCTGATGTTGCTCAGATATTAGATTCTGCCGTTACCAGTCTGCATCCATGCTGTCCTCAAAACCTTCCTATATACAGAGAAATTAAAATGTGCATGGGAAGAATCAAAACACAGATTTTAGCTCTTATCCCAACTTGA 3978 0.409 MNRVSFLLEIFECCLIPDFLPGLMLYFVVVYSNLFSFSFLHLFRGAVKGLRTLDSMDVVKLEIDKEFMAPTRKSRSVNKRFSSLNEVSPDKYGVNSNKNMQRVLISFHRSSCLITNLFLAIVLHALDVSSAQKKKLSDKLGSQWSKEELERFYEAYRKYGKDWKKVAAIVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSERESSDAPGSQKLLKRKRGKVHLSFSKDSVQCQSTTSIDDCLSLLKRRHFDGSQPRAVGKRTPRIPVSYSYKKNDRDNFVLPIKRGLRSEVNANDDEVAHVAALALTEAAQRGGSPHISQTQYTRSEQKSSPVQSWEIMHQQSEIAHAKSHDATLDEECLEGCIESRGAENGEYARDTSSFMGMEGVGTVEVQQKGKKIYRKKETVENVRNHQLDDGGEACSGTEGGINFNSLKEKVDIEVTNAKPEQFSLKGERKRSKKLFFGDESSALDALQTLADLSLMMPVSNMESESPVQLNEERMIVDKDDKSALPEATFRSRNRDKMKLPVPKQKVLHADPGVETLITRKSKLGRELENDTNAFAESKEQLPSTDRTWKRKRKSVASKVSNAKLDFRSSYSLNNEAVVDEENKPMIKGKHTGEVFTLPKQLKSVRSSESSLYSDQKDVTVLTAEVPLASEVNLPTKQRSRRKTGLQRTFMEKEKFSDDMLKNQRSKCSTGLQDRVSYLKEMLSGCLSSYMVRRWCTFEFFYSAIDYPWFAKREFIEYLNHVGLGNIPRLTHVEWSVIKSSLGKPRRFSEHFLCEERQKLEQYRESVRKHYTELHTGIRDGLPTDLARPLFVGQRVIAIHPKSREVHDGSVLTVDHDKCRVQFDRPELGVEFVMERFVSSLGVGIGLEVLVSVVILFLGSRAIGMVVAKFMVLVVALFLGSRAIGMGAAGFVVLDIDCMPVNPLDNMPEALRRQIGAGKVSCLSNQPQMNGSSNFGGCGTCASGGPLEKASTPSKVKQGKGDVHYAIAQTKADSIDNIDTQLEAYAQPCILTHHQAREADIRALSELTRALNKKEKLLMELRNANGDILESQNDIDCFKDSESFKKHYATVLVQLKEASGQVSSALLRLRQRNTYPENSLSPWVKPHASFNIHDGLPCTLNSSLTQEIGSSVIEIIKGSKLRAHAMVDAAIQALSSTKEGEDAFMRIGQVLDSVDYQQLALYSRLPVIRSQEQVNGSFDHYSQSICCASEPLHSDASGPKLVNDSDKVDTQIPSELITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCPQNLPIYREIKMCMGRIKTQILALIPT 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0225 1325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 136 178 IPR017930 -
Glsi11g0225 1325 PANTHER LIN-9 68 877 IPR010561 GO:0006351|GO:0017053
Glsi11g0225 1325 SUPERFAMILY Homeodomain-like 139 187 IPR009057 -
Glsi11g0225 1325 MobiDBLite consensus disorder prediction 330 348 - -
Glsi11g0225 1325 MobiDBLite consensus disorder prediction 327 348 - -
Glsi11g0225 1325 CDD SANT 144 178 IPR001005 -
Glsi11g0225 1325 Gene3D - 80 196 - -
Glsi11g0225 1325 Coils Coil 1047 1077 - -
Glsi11g0225 1325 Pfam Myb-like DNA-binding domain 142 179 IPR001005 -
Glsi11g0225 1325 ProSiteProfiles SANT domain profile. 139 176 IPR017884 -
Glsi11g0225 1325 ProSiteProfiles Myb-like domain profile. 142 183 IPR001005 -
Glsi11g0225 1325 SMART sant 140 188 IPR001005 -
Glsi11g0225 1325 Pfam DIRP 743 844 IPR033471 -
Glsi11g0225 1325 SMART DIRP_2 744 845 IPR033471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0225 Glsi-ChrGlsi11 1492806 1513319 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi11g0225 DIRP 4.7e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0225 11 1492806 1513319 Glsi11g0225 11 1492806 1513319 ECH