Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0211 ATGGGTAGTGATCTGGAATCCTTAGCAGAAGCGACCTCTGGGGCCATAGGATCACTGTTGAGCACTACCATCTTGTACCCGCTTGACACCTGCAAGACCAAGTACCAAGCCGAGGTTCGGGCCCATGGCCAGCAAAAGTATAGGAACCTTTCTGATGTGTTATGGGAAGCAATATCTAGCCGTCAGGTGCTTTCGCTTTACCAGGGAATTGGAACAAAAAACCTTCAATCCTTCATTTCACAGTTTGTCTACTTCTATGGCTACAGCTACTTTAAAAGATTCTATCTGCAAAAGAGTGGTTCTACATATATTGGAACCAAAGCAAACTTGGTCATCGCTGCTGCTGCTGGGGCCTGCACTGCCATTTTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACGAGTGCCTTTGGAAAGTCTAAAGGGCTTTTGAAGACCCTTACAGAAGGCACATGGAATGATGCATTTGATGGTCTCAGCATTTCCTTACTGCTGACCTCAAACCCTGCAATTCAGTATACAGTGTTTGATCAGCTGAAACTTCGAGCCCTGAAGAATAAGCAAAACAATGAAGGCAAAGTATTATCTCCTGTATCCCTTTCTGCATTTATGGCCTTTCTTTTAGGTGCTATTTCAAAGAGTGTGGCTACGGTCCTGACATATCCTGCTATCAGGTGCAAGGTCATGATTCAAGCTGCAGACTCTGATGAAACAACCTCGAAACCACAGCAAAAGACACAGAAAACAGTGTCCGGAGTTCTCTACGCAATATGGAAAAGGGAGGGTCTACTGGGTTTCTTCAAAGGATTGCATGCTCAGATCTTAAAGACTGTTTTGAGCTCAGCATTGCTTTTGATGATCAAGGAGAAGATATCTGCCACTACTTGGGTTCTTATACTTGCAATTAAAAGGTATCTATTGCTCCCAAGGGGTAGAGTAAAAATCCTATAA 957 0.4431 MGSDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQQKYRNLSDVLWEAISSRQVLSLYQGIGTKNLQSFISQFVYFYGYSYFKRFYLQKSGSTYIGTKANLVIAAAAGACTAILTQPLDTASSRMQTSAFGKSKGLLKTLTEGTWNDAFDGLSISLLLTSNPAIQYTVFDQLKLRALKNKQNNEGKVLSPVSLSAFMAFLLGAISKSVATVLTYPAIRCKVMIQAADSDETTSKPQQKTQKTVSGVLYAIWKREGLLGFFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAIKRYLLLPRGRVKIL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0211 318 FunFam Peroxisomal adenine nucleotide carrier 1 3 297 - -
Glsi11g0211 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Glsi11g0211 318 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Glsi11g0211 318 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Glsi11g0211 318 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Glsi11g0211 318 Gene3D Mitochondrial carrier domain 3 297 IPR023395 -
Glsi11g0211 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 316 IPR045900 GO:0005347|GO:0006635|GO:0015217
Glsi11g0211 318 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Glsi11g0211 318 Pfam Mitochondrial carrier protein 108 187 IPR018108 -
Glsi11g0211 318 Pfam Mitochondrial carrier protein 5 98 IPR018108 -
Glsi11g0211 318 SUPERFAMILY Mitochondrial carrier 5 292 IPR023395 -
Glsi11g0211 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Glsi11g0211 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0211 Glsi-ChrGlsi11 1415862 1418394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0211 23 311 Chloroplast and Mitochondria Gene Families AT1G25380 25.974 7.48e-11 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0211 11 1415862 1418394 Glsi11g0211 11 1415862 1418394 CCT
Glsi11g0211 11 1415862 1418394 Glsi11g0211 11 1415862 1418394 ECH