Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0200 ATGGCCTTCTCTCTCTCCTCCTTCAAAACCTCTTCGCTGTCCCTCTCACTTGTTTTCATCTTACTATTCTTCCTCTTAAACCCACCTTCATCCTCTCCCTCTCTCTATCCCCCTCCCCGCAGATTACTTCTCGTCTCCTCTAATACAACTACGTTTACGTCTACCTCTACCTCCTGCTCCTCCACCAGATCCCACTCCAATGGCCTCATCAACTACTTGTCCTTCCATTACTGCCTTTTCCATCAAAACTCCTTCCTCTCCATCCCTTTTCTTTCCCTATTTCTTCTTTTACACTTCTATATCCTCATCAAAACAGCCCAAGATCATTTCTCTGTCGTCACTACCAAGCTCGCTTTTCACCTCAATTTGTCACCCAGCATGGGCGCTGTAACCCTCTTAGCCTTGGGCAATGGTGCGCCCGATGTTTTCGCATCCTCTGCTGCTCTTCGTGGGGGTGAATACCGAACTGGGTTGGGTGCCATACTCTCTGCGGGAACATTTGTCTCAGCTCTTGTAGTTGGGTTTGTAGCAATATACGCCGCCCCCTTCTCTGTTGATCCGGCACCTTTTGTGAGGGATGTCTTATTTTACTTGATAGCCGCGTTGTTCCTCTTCTATGTGTATCTTAGTGCCGAGATTTTTCTATGGCAAGCAATTGGATTTGTGGGTTTTTATTTGTTTTTTGTTGGTTTTGTGTTCTACATGGATTTGGGAATGGGAGGTCGTAGGGAGAAGAGGACGAATGTGGGGAGTTTTGCTGGAGATCTTGAGGGACAGAAGGAGCCGATAACAGCCGACTTCGAAATCAAAGTTTCTGGAAATCTAGACGAAGGGAAACGCAGTTCTCAATTACGTCGAGCTCTTGTAATGATTTCATCAGCATGTGAGCGTCCTGTTTCAGTTCTCTTAAAATTGACAATACCTCAATTCAGACCATCAGAATGGAGCAGATTTTATGCATCAGCTAATGTTGCCTTTTGTCCACTAGCCCTTTTGTATGCCTGCAACTCATTCATGCCATTTAGTTATCCCATAGCTTTTCTCCTTCCCAAAACTCATTTCCCCCTCTGGTTGGTTGTGCTCATGACGAGCTCCTCTCTAGCGCTTCTTCACTTCATAATGGAAAAAGAACCCCCAAAAACTGAGGAAATTCCTGTGGTGCTCATGGCATTTGTTATGAGTGTATTTTGGATATCTACTGTCGCTGGAGAACTGTTAAACTGCCTTGCAGAATTAGGTACACTTCTCAAACTGCCGCCAGCACTCCTTGGTCTTACAGTGCTGGCATGGGGAAATTCAGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGCCATCCAGCAATGGCAATGGCCGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTGGGTCTTGGGACTGCTTTGGTGATGCAGACTGCCAAAGTTTATCCTAGTGCTTATGAGCTTAATTTCCACGTGGGTATTGTGATAGCATTTGCATTCCTGCTTTTAAGCCTTATGGGGTCTCTCCTGGTGATTATTTGGTGCAGATTCCGAGTGCCAAGGTTTTGGGGATTCTGTCTGGTTGGTCTCTATATTGCTTTTATGGCAGTGAGCCTGGTAGCAGCCATGTTTTCAGGGTGA 1635 0.4599 MAFSLSSFKTSSLSLSLVFILLFFLLNPPSSSPSLYPPPRRLLLVSSNTTTFTSTSTSCSSTRSHSNGLINYLSFHYCLFHQNSFLSIPFLSLFLLLHFYILIKTAQDHFSVVTTKLAFHLNLSPSMGAVTLLALGNGAPDVFASSAALRGGEYRTGLGAILSAGTFVSALVVGFVAIYAAPFSVDPAPFVRDVLFYLIAALFLFYVYLSAEIFLWQAIGFVGFYLFFVGFVFYMDLGMGGRREKRTNVGSFAGDLEGQKEPITADFEIKVSGNLDEGKRSSQLRRALVMISSACERPVSVLLKLTIPQFRPSEWSRFYASANVAFCPLALLYACNSFMPFSYPIAFLLPKTHFPLWLVVLMTSSSLALLHFIMEKEPPKTEEIPVVLMAFVMSVFWISTVAGELLNCLAELGTLLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVMQTAKVYPSAYELNFHVGIVIAFAFLLLSLMGSLLVIIWCRFRVPRFWGFCLVGLYIAFMAVSLVAAMFSG 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0200 544 Pfam Sodium/calcium exchanger protein 92 233 IPR004837 GO:0016020|GO:0055085
Glsi11g0200 544 Pfam Sodium/calcium exchanger protein 388 537 IPR004837 GO:0016020|GO:0055085
Glsi11g0200 544 Gene3D - 322 539 IPR044880 -
Glsi11g0200 544 Gene3D - 123 250 IPR044880 -
Glsi11g0200 544 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 282 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0200 Glsi-ChrGlsi11 1355782 1359071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0200 4 543 Antiporters AT1G08960 68.784 0.0 681