Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0197 ATGCCTGAGGGGGTCAGGGCCAGAGCCATTGTTCACGGATTTGACCACTCTAAATTTGGGACTTGGGACCCCCGCAAGAAAGCTCAGAAAGAAAAGAACGATCGCCACAAGATTCGAACCTTTGGGGACAAGTGTTGTCACAGATATTCATATCCTGTTGCTTTTAGACTACAGATTTGGCTTTTGTTGCCTTTTCCGCCTCAACCACTCCAAATCCTGCCGGGGTTTGATCCAACTTTAACATCATTGAGATTAACATCCCATGATATTGTCGTTTTACACTTACTTGAGTGGATTGAATATAACCCTCTTTCTTCTATACTAAGAGATATGGAACTAAGTGAGAACGTGGATGAGGGGTACTCACCACACCGATACCGTGTAAATGTAATTGAGCTTGGGATATTTGAAGCGACAAAGCTTCACTGGAGATCATGTTCAATTCAATGCAATGTATTTAACGGTGAAATTGGAATAAGGTTACAGCTGGGCATTTTTCTTCAGAAGGAAAAGGACTTGGGTAGGTTGAGGCCAGAGGGGAAAAAGCTGAATGCTGATAATCATATTCTACTTTTGAGAACTGACAGTACTGGTATTGTACCTGCAGGGTCACCTACCGTTGCTACCGAGACCTATACTAACATAAGCTACAACTTGAATTCACAAAACCATAACCGTCACCCTGCTCATTTCCCCTTCAAAACCAAAGTTATAATCATCGTAGCCGTCGCCTCGGTTATGTTGGTCCTATTTGCTGTTTTTCTGATCATATTCTTACTTCGTCGGCTAAAATTGTCCAGCAGCAATAGAACTGGCAAAGATAACAGAAACAGTAGAGTACGTCATGACACAAGTTGCAGCCTCATCGCTTCCGCAACATTGAACTTCAATTCTAGCCCAGATGTGAAGGGAGGGTGTCTTAGTGGGGGGAATATCAGCAGGACACCAGCAACAAAAGTGAGAGGAGTTCAAGTGTTCACATACAGGGAGCTAGAAGTGGCCACAGACGGATTCAGTGAAGCAAAGGTAATTGGCAATGGAGGCTTTTGCTCGATGTACAAAGGAGTCTTGAGTGATGGAACTTTGGCAGCAATCAAGCTGCTGCGCAGGGAAGGTAAGCAAGGGGAGCGTGCCTTCCGAATAGAGGTGGATCTGCTAAGCCGGTTGCACTCTCCATATTTGGTGGAGTTGCTCGGCTATTGTGCTGATCAACACCACAGGCTATTGATATTTGAATTCATGCCCAATGGTACACTGCACCATCATCTCCACTCTCCTATCAGCCAAATTCAACCGTTGGATTGGTGGACCCGGATGAGGATTGCCCTTGATTGTGCCAGGGCTCTGGAATTCCTGCATGAACACGTGGCCCCACCGGTGATCCATCGCGACTTCAACTGCAGCAATGTTTTACTGGATCAAAATTTCCGTGCCAAGGTTTCAGATCTCGGATTGGCAAAGATGGGGTCGGAGAAGATGAACGGTCAGATTGCGACCCGCGTGTTGGGGACCACTGGATATCTGGCACCAGAGTATGCCTGCTCGGGCAAGCTTACCACAAAGTCAGATGTTTACGGCTATGGTGTGGTTCTGCTGGAGTTGCTAACAGGACGCGTACCAGTTGATATAAAGCGGCCCCCAGGAGAACATGTGCTTGTCTCTTGGGCTCTTCCAAGGTTAACAAACAGAGAAAAGCTGGTGGAAATGGTTGACCCATCTCTACGAGGGCAGTACTCCAAGAAGGATCTAATTCAGATAGGTGCCATAGCAGCCATGTGCATACAGCCAGAAGCAGATTACAGGCCGCTTATGACAGATGTTGTACAATCGCTGATACCACTCATGAGGAACCCGTCTCTCTGTTCATTTAGTTCCACAAGATTTCACAAGCAAACATAA 1899 0.4629 MPEGVRARAIVHGFDHSKFGTWDPRKKAQKEKNDRHKIRTFGDKCCHRYSYPVAFRLQIWLLLPFPPQPLQILPGFDPTLTSLRLTSHDIVVLHLLEWIEYNPLSSILRDMELSENVDEGYSPHRYRVNVIELGIFEATKLHWRSCSIQCNVFNGEIGIRLQLGIFLQKEKDLGRLRPEGKKLNADNHILLLRTDSTGIVPAGSPTVATETYTNISYNLNSQNHNRHPAHFPFKTKVIIIVAVASVMLVLFAVFLIIFLLRRLKLSSSNRTGKDNRNSRVRHDTSCSLIASATLNFNSSPDVKGGCLSGGNISRTPATKVRGVQVFTYRELEVATDGFSEAKVIGNGGFCSMYKGVLSDGTLAAIKLLRREGKQGERAFRIEVDLLSRLHSPYLVELLGYCADQHHRLLIFEFMPNGTLHHHLHSPISQIQPLDWWTRMRIALDCARALEFLHEHVAPPVIHRDFNCSNVLLDQNFRAKVSDLGLAKMGSEKMNGQIATRVLGTTGYLAPEYACSGKLTTKSDVYGYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPRLTNREKLVEMVDPSLRGQYSKKDLIQIGAIAAMCIQPEADYRPLMTDVVQSLIPLMRNPSLCSFSSTRFHKQT 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0197 632 Gene3D Phosphorylase Kinase; domain 1 310 413 - -
Glsi11g0197 632 Pfam Protein tyrosine and serine/threonine kinase 341 611 IPR001245 GO:0004672|GO:0006468
Glsi11g0197 632 FunFam Receptor-like serine/threonine-protein kinase ALE2 414 629 - -
Glsi11g0197 632 FunFam Serine/threonine-protein kinase PBS1 307 413 - -
Glsi11g0197 632 Gene3D Transferase(Phosphotransferase) domain 1 414 621 - -
Glsi11g0197 632 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Glsi11g0197 632 CDD STKc_IRAK 344 614 - -
Glsi11g0197 632 PANTHER OS07G0668900 PROTEIN 291 618 - -
Glsi11g0197 632 ProSiteProfiles Protein kinase domain profile. 338 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0197 Glsi-ChrGlsi11 1338280 1344789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0197 306 617 Receptor kinase-like Gene Family AT3G58690 62.222 3.98e-144 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Glsi11g0197 PK_Tyr_Ser-Thr 9.2e-40 CL0016