Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0166 ATGGACTGCAACAAGGATGAGGCTATGAGGGCTAAGCAAATTGCAGAAAGTAGAATGCAAAATGGTGACTTTGTAGGAGCACTGAAGTTTGCTATTAAGGCCCAAAAACTGTTACCTGCTATTGAGAACATTGCTCAGATCCTTGCAGTTTGTGAGGTTCACTGTGCTGCACAGAACAAACTCTCAGGGTCTGAAATGGACTGGTATGGAATTCTTCAGACTGAACAATTGGCTGATGAAGCAACCGTAAGGAAACAGTACAGGAAGCTTGCACTCCTACTTCATCCCGATAAAAATAAATTTTCAGGTGCAGAGGCTGCTTTCAAGTTGATTGGTGAGGCAAATAGGGTGTTAAGTGACCAAGCAAAGCGTTCTTTGTATGACATGAAGTATAGAGCTTTACAAAGAACTGCAGCAGCTAAGCTCCCATCCCATCACTCAAATGGAAACGTATTTGCCAAGAAACATGATATAATGTCGGGAAACTATCAGAATAATTCTTATTCACAGTCCCATCGGCAGACTGCACAGCAGACCTTCTGGACAGCTTGTCAACATTGTAATACTAGGTATCAATACTACAAAGCCATTGTAAATGCAACCTTACGCTGCCAGCAATGTTCTAGACCCTTCATAGCTCATGATTTGGGATTTCATGGTGTCCCACCAGGATATAGACGGCCATCATTTAATAACCAGAAAGAATATCCGATGCATGGACCACCAAAATCACCCTCAGAAAGTAATGGTGGAAAACCTTTTAGCGAGAGACAAGAGGGTAATTTTGTACAGTCAGAATCCATGACAAAATGCACTGTTGGAGTTGGTGGGCATCGTAAAGGTGAAAAGAGTAAAGATGGCTATGTGGCTGCAGGAGGAGCAAATGTAGATGTTGGACCGTCCAAGCATGCTTCAGCCAAAACCAGGGAATCACAAACCTCAACTTATGTTGGAAGCAAGAGAGCAAGGCAGTCAGTACCAGATTCCAGACAAAGTTGCAAGACTGAAAATGGTAATGGCTTGAAAGATGCCAATGCTCGAGAAAATGGTGTTGATCCTTCTGGACTTAATGCAGGAGTACAGCCTAGGAGATCTTCCAGGCAAAAGCAGCATGTTTCTTACTTTGAAACATCTCATGGTGATGGTTTTGAGAGTCCTTCTAAAAGGCCACGACGAAATGAATCATCTAACACCATTGAAGTGGAGAAAAGAGAAATACCTGCCAGTGGCAGGTTTTTTAATCACAATTCTTCAGCTAGTTCTGCTGCTGGTATGGGTGGTCAGAACAGAGAGCAGAGAAATAAAGCAAGTGATCTGCCCGAAGAAGTATTTTTACAGAGAAAGAGCAAAATTGAGCAGTCTAAGTCAGATCTTCATGATACAAAGACAAAAGCTGACCACTGTTCTCCATTGAATTCAAATGTCCCTTCCAATCCAGATATCATCAGTTGTCCTGATCCAGATTTCAGTGATTTCGACAAGGATAGGGCAGAGAATTGTTTTGCTATTAACCAATTCTGGGCTATTTATGATCCCAGTGACAGTATGCCAAGATTCTATGCTCTCGTCAAGAAAGTTTTGTCCCCTGGCTTCAAGTTGCTGATTACTTGGCTGGAGGCTGAGCCAGATGACCAAGGTGAGATTGATTGGCATGATGCAGAGTTGCCTGTTGCTTGTGGTAAGTTCAAACTAGGTACATCTCAGGAAATTGAAGATCGTGCTATGTTCTCTCATAAGATGCATTGCATAAAAGGAAGTGGTAGAAGGCATTATCTGGTATATCCTAGGAAGGGAGAAACTTGGGCAATTTTTAGAGATTGGGATATTGGATGGAGTTCTAATCCAGAAAAGTATTCTAATTATGAATTTGAATTTGTGGAAGTCCTATCAGATTTTACTGAGAATGTTGGCATTGAAGTTGCTTATCTTGGCAAAGTGAAAGGGTTTGTTAGCCTCTTCAAGCAAACTGAGCATAATGGAATTGGCTTATTTTGTGTTCCACCTAATCAGCTATATAGGTTCTCACATCGAATTCCTTCATTTAAGATGACTGGTGATGAAAGAGAAGGTGTTCCACAGGGATCTTTTGAACTTGACCCTGCTGGTCTGCCTATGGATCTTTTTGACCTTGGTGATTTGAAGATGGGAGATGGAATGTTAAACTCTGGAGTTAGTAGTTCATGCCATGAATCATCTGAACACAAAGTGGAGCAGGTGATGGCTAATGAGAGTAGTCATGATGCGAAGATGCATGAGAGTAATGACATCGAAAGAGCTTCTTCAATACTTAGAAGATCACCAAGGGGGTCAGACAGAAAAAATCTGGATAACAGTAAAGTTAATAGAAGTCAAGATATGACAAGAGAGAATGGTGGCAAAGACATGAGCCACAAGGACTTCAGTCAACCTGAGGGAACCAATGAGAGTGGTCATGAGGCAAAGATACATGAGAGTAACGATGCAGAAAGAGTTTCCTCAATACTTAGAAGATCGCGAAGGGGGTCAATCAGAAAAAATATGGAAAATGGTGAGGTAAATAAAAGTCAAGATATGATAGGAGAGGATGGTAGCAAAGACATAGGCCACAGGGACTTCAGTCAACCTGAGGGAACTGCGGCTCCTGCAAGTCAGGCAGATGAGAGGGTCAAAACACCAAAGAAACATGAGAAAAATGATTGTGAAGGAGAGAGACTGAAAGTACGAAGATCACCTAGAGATTTAAGTAAGAAAAAATCTCAAGATGCAGATCAATGCACTACAGGTGAGGTAAGTGGTGAACATCTAGATGCCAACAAAAAGTTGAAGGATGGCAGTTTCTCTCAGTCTGTAGGAAGTGTTTGTAGACCTTTCCCAGAAGATTGCAGAGTTCCCAAAGCATCATGTTATGACTTCAATATGGAAAAATCTCAAGAAAAGTTTCAGCGTGATCAGATATGGGCATTATATGGTGATAGGGATGGGATGCCTGACATTTACGCACAAATTAAGGAGGTTGAATTTACCCCTAATTTTAGATTGCGCGTTGCCTTGCTTGAACCATTTTCATCACCCAAAGGCAGAAATAGACCAGCATCTTGTGGTACCTTTACGGTTAAAAATGCTAAAACACAGATCCTTTCCCGCTCTGCTTTCTCTCATCAGTTAAAAGTTGAACCCGTGGCAGATAATAGATTTGAAATTTACCCAAGTAAAGGTGAGATTTGGGCTCTATACAAGGACCAGAACTATGAATCAACTGATTCGAACCAGGGGAGAGGTGATTGTCACATTGTGGAAGTATTAGCGGATAGTGACGAGAGTTTACAAGTTGTGGTTCTGGTGCGTCATAGCGACTCTAAGTCAATTTACATGGCTCCCAGAGCCCAGAGGTCTAAAACTGGTATCATTGAAATACCACGAGAGGATGCGTATAGATTTTCTCATCAGATTCCTGCATTTTGGCACCGTGGGGAAGACAATGTTCATCTGAGAGGGTGTTGGGAGCTTGATCCTTCCTCAATTCCTGGTTTTGTAATACATTTAGACTGA 3528 0.4175 MDCNKDEAMRAKQIAESRMQNGDFVGALKFAIKAQKLLPAIENIAQILAVCEVHCAAQNKLSGSEMDWYGILQTEQLADEATVRKQYRKLALLLHPDKNKFSGAEAAFKLIGEANRVLSDQAKRSLYDMKYRALQRTAAAKLPSHHSNGNVFAKKHDIMSGNYQNNSYSQSHRQTAQQTFWTACQHCNTRYQYYKAIVNATLRCQQCSRPFIAHDLGFHGVPPGYRRPSFNNQKEYPMHGPPKSPSESNGGKPFSERQEGNFVQSESMTKCTVGVGGHRKGEKSKDGYVAAGGANVDVGPSKHASAKTRESQTSTYVGSKRARQSVPDSRQSCKTENGNGLKDANARENGVDPSGLNAGVQPRRSSRQKQHVSYFETSHGDGFESPSKRPRRNESSNTIEVEKREIPASGRFFNHNSSASSAAGMGGQNREQRNKASDLPEEVFLQRKSKIEQSKSDLHDTKTKADHCSPLNSNVPSNPDIISCPDPDFSDFDKDRAENCFAINQFWAIYDPSDSMPRFYALVKKVLSPGFKLLITWLEAEPDDQGEIDWHDAELPVACGKFKLGTSQEIEDRAMFSHKMHCIKGSGRRHYLVYPRKGETWAIFRDWDIGWSSNPEKYSNYEFEFVEVLSDFTENVGIEVAYLGKVKGFVSLFKQTEHNGIGLFCVPPNQLYRFSHRIPSFKMTGDEREGVPQGSFELDPAGLPMDLFDLGDLKMGDGMLNSGVSSSCHESSEHKVEQVMANESSHDAKMHESNDIERASSILRRSPRGSDRKNLDNSKVNRSQDMTRENGGKDMSHKDFSQPEGTNESGHEAKIHESNDAERVSSILRRSRRGSIRKNMENGEVNKSQDMIGEDGSKDIGHRDFSQPEGTAAPASQADERVKTPKKHEKNDCEGERLKVRRSPRDLSKKKSQDADQCTTGEVSGEHLDANKKLKDGSFSQSVGSVCRPFPEDCRVPKASCYDFNMEKSQEKFQRDQIWALYGDRDGMPDIYAQIKEVEFTPNFRLRVALLEPFSSPKGRNRPASCGTFTVKNAKTQILSRSAFSHQLKVEPVADNRFEIYPSKGEIWALYKDQNYESTDSNQGRGDCHIVEVLADSDESLQVVVLVRHSDSKSIYMAPRAQRSKTGIIEIPREDAYRFSHQIPAFWHRGEDNVHLRGCWELDPSSIPGFVIHLD 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0166 1175 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 710 - -
Glsi11g0166 1175 Pfam DnaJ domain 67 128 IPR001623 -
Glsi11g0166 1175 Gene3D DnaJ domain 53 148 IPR036869 -
Glsi11g0166 1175 Pfam Domain of unknown function (DUF3444) 954 1151 IPR024593 -
Glsi11g0166 1175 Pfam Domain of unknown function (DUF3444) 480 687 IPR024593 -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 359 375 - -
Glsi11g0166 1175 SMART dnaj_3 66 123 IPR001623 -
Glsi11g0166 1175 PRINTS DnaJ domain signature 103 123 IPR001623 -
Glsi11g0166 1175 PRINTS DnaJ domain signature 87 102 IPR001623 -
Glsi11g0166 1175 PRINTS DnaJ domain signature 69 87 IPR001623 -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 248 271 - -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 305 339 - -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 453 474 - -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 721 933 - -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 880 916 - -
Glsi11g0166 1175 CDD DnaJ 67 120 IPR001623 -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 382 409 - -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 730 844 - -
Glsi11g0166 1175 SUPERFAMILY Chaperone J-domain 62 132 IPR036869 -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 851 865 - -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 224 440 - -
Glsi11g0166 1175 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Glsi11g0166 1175 MobiDBLite consensus disorder prediction 411 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0166 Glsi-ChrGlsi11 1150785 1154312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0166 4 223 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.071 2.73e-29 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0166 11 1150785 1154312 Glsi11g0166 11 1150785 1154312 CCT
Glsi11g0166 11 1150785 1154312 Glsi11g0166 11 1150785 1154312 ECH